Caballeronia cordobensis: BRPE67_ECDS00200
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Entry
BRPE67_ECDS00200 CDS
T03604
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bue
Caballeronia cordobensis
Pathway
bue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRPE67_ECDS00200 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bue03019
]
BRPE67_ECDS00200 (recQ)
03400 DNA repair and recombination proteins [BR:
bue03400
]
BRPE67_ECDS00200 (recQ)
Enzymes [BR:
bue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRPE67_ECDS00200 (recQ)
Messenger RNA biogenesis [BR:
bue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRPE67_ECDS00200 (recQ)
DNA repair and recombination proteins [BR:
bue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BRPE67_ECDS00200 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
AAA_30
HD-CE
Motif
Other DBs
NCBI-ProteinID:
BAO92517
LinkDB
All DBs
Position
p2:19776..21410
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AA seq
544 aa
AA seq
DB search
MKPVRKPLDREMENALRRVFGFPNLRAGQEDVIRSVMDGHDTLAVMPTGAGKSLCYQLPA
LQFEGMTLIVSPLISLMRDQATKLTEAGIANAVLNSALSASELHDAMDALARNALRMLFV
TPERLVDPEFVAQLKSLDVPEIALVVIDEAHCISQWGHDFRPAYVELIQAIKLLGRPPIL
ALTATATPAVMTDITRELQMRAANVIHTGVYRENLRFGVEQMTNLEDKRKRVVELTCSEK
GSGIVYCATVGECEALHAALIEAGVAAERYHGKLAAGARSASQDAFMEERARVMVATNAF
GMGIDKPDIRFVIHAQMPGSLDAYYQEAGRGGRDGEPARCTLLFELKDKQVQQFFLSGRY
PSAQTIERVARTVRELANETSSKTLEKPLERLRDALPDVGANKLRVAATLLHDIGMTRRT
RHGGMKLIDEDGSKADAKLGDASHAYVARAEQDRAVLERMISYAQSAQCRWRILLDYFAH
NADSSSDVHYAPPDDELGGKTCGVCDNCLHPPEVIESPRELLEHARKKEETKPKRAVPTF
ERGE
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgtgcgcaagccgctcgaccgggaaatggaaaatgcattgcgccgggttttc
ggatttccgaatctgcgagcagggcaggaggacgtcatccgcagcgtgatggacgggcac
gataccttggcggtcatgccgaccggtgcgggcaagtcactatgttatcaactgcccgcg
ctgcaattcgaaggcatgacgctcatcgtatcgccgctcatatcgctcatgcgcgatcag
gcgacgaagttgaccgaagccggcattgcgaatgccgtgctcaacagcgcgctgtccgcg
agcgagttgcatgatgcaatggacgcgctcgccaggaacgcgctgcgcatgctgttcgtt
acaccggaacgtcttgtcgacccggagttcgtcgcgcagctcaagtcgctggatgtaccc
gagatcgcgctcgtcgtcatcgacgaggcgcattgcatttcgcagtgggggcacgacttt
cgtcccgcgtatgtcgaactgatccaggcgataaagttgttgggccgcccgccaatactc
gcacttaccgcaaccgcgacgcctgcggtcatgaccgatatcacgcgcgagcttcagatg
cgggcggccaatgtcattcatacaggcgtctatcgcgaaaatttgcgtttcggcgtcgaa
caaatgacgaacctcgaggataagcgcaagcgggtcgtagagttgacgtgcagcgagaag
ggcagcggcatcgtctattgtgcgactgtcggggaatgcgaggcgcttcatgcggccctg
atcgaagcgggcgttgcagcggagcgctatcatggcaagctcgcggcgggcgcgcgatcg
gcgtcccaggacgccttcatggaagaacgcgcgcgggtgatggtcgcgaccaatgcgttc
ggcatgggcatcgacaagcccgatatccgcttcgtgatccatgcacagatgcccggcagt
ctcgacgcgtactatcaggaagcgggccgcggcggacgcgacggcgagccggcgcgctgc
acgttgctcttcgaactgaaggacaagcaggtgcagcagtttttcctgagcggccgctat
ccgagtgcgcagaccatcgaacgcgttgcgcggacggtgcgtgaactcgcgaacgaaacg
agcagcaagacgctggagaagccgctcgagcgcctgcgtgacgcattgcccgacgtgggc
gcgaacaagctgcgcgtcgcggcaaccctcctccacgatatcggcatgacgcgccgcacg
cgccacggtggtatgaagctaatcgatgaggacggcagcaaggcggacgcgaaactcggc
gatgcatcgcacgcctatgtagcgcgcgccgagcaagaccgggccgtgctggaacgcatg
atcagttatgcgcaaagcgctcaatgtcgctggcgcattttgctcgattacttcgcgcac
aacgcggactcatcatcggacgtacattacgccccgcccgatgacgaactcggcggaaag
acatgtggcgtatgcgataactgcctgcatccaccggaagtgatcgagagcccgcgcgag
cttctcgaacacgcccgtaagaaagaagagacgaagcccaagcgcgcggtgccaacattc
gaacgaggcgaatga
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