Buttiauxella sp. 3AFRM03: D8682_03390
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Entry
D8682_03390 CDS
T05676
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
buf
Buttiauxella sp. 3AFRM03
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
buf03009
]
D8682_03390 (dbpA)
Enzymes [BR:
buf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
D8682_03390 (dbpA)
Ribosome biogenesis [BR:
buf03009
]
Prokaryotic type
rRNA helicases
D8682_03390 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
AAA_22
CMS1
Toxin_2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AYN26120
UniProt:
A0A3G2I9T1
LinkDB
All DBs
Position
complement(462109..463482)
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AA seq
457 aa
AA seq
DB search
MTSFSTLNVLPAEQLANLTELGYHTMTPVQAAALPAILAGKDVRAQAKTGSGKTAAFGLG
LLQHIDASQFITQSLVLCPTRELADQVAKELRRLARYMPNIKVLTLCGGQPFGAQRDSLQ
HAPHVIVATPGRLLDHLKKETVNLDALQTLVLDEADRMLDMGFADAIDEVISHAPQDRQT
LLFSATWPTAIAAISSRVQRTPETIEIDSVDELPSVEQQFYEISRSGKISLLQKLLSKHQ
PASCVVFCNTKKDCQSVCDALTESNQSVLALHGDMEQRDRDQTLVRFANGSSRVLVATDV
AARGLDIKALEMVINYELSWDPEVHVHRIGRTARAGESGLAISLCAPEEAQRASVLAEML
NLSLNWQPAPTGGSIKPLEATMTTLCIDGGKKAKMRPGDILGALTGDMGLDGADIGKIDV
HPMHVYVAVRESVARHAWKQLQQGKIKGKSVKVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgacatctttttctaccctaaacgttctgccagcagaacaactcgccaatctcaccgaa
cttggttaccacaccatgacgcctgttcaggcggctgcattacccgcgattctggctggg
aaagatgtccgtgcacaggcgaaaactggcagtggtaaaacggcagcattcggtctgggc
ttgctgcaacacattgatgccagccagtttattactcaatcgttagtgttatgcccaact
cgtgaactcgcagaccaggtggcgaaagagctacgtcgtctcgcgcgctatatgccaaat
atcaaagtgttgacgctttgtggtggccagccgtttggtgcgcagcgcgactcgctgcaa
cacgcgcctcatgtgattgtggcaacgccaggtcgtttgctcgatcacctgaaaaaagag
accgttaatttagatgccctgcaaacactggtactggatgaagctgaccggatgttggat
atgggctttgcggatgcaattgacgaagtcatcagccatgcgccgcaagacaggcaaacg
ttgctgttctccgcaacgtggccaaccgccattgccgctatcagttctcgtgtgcagcgc
acgccagaaactatcgaaattgattcagtagacgaattgccgtctgttgagcagcagttt
tatgaaatctcccgcagcggcaaaatcagcctgttgcaaaaattactcagcaagcatcag
cctgcgtcttgtgtcgtgttctgtaataccaaaaaagattgccagtccgtatgcgatgcg
ctgacggaaagcaaccaaagtgtgttggcgctacacggtgatatggaacagcgcgaccgc
gaccaaacgctggtgcgtttcgccaatggcagcagccgcgtgctggtggcgaccgatgtt
gccgcgcgtggtctggatatcaaagcactggaaatggtcattaactacgagttgtcgtgg
gacccggaagttcacgttcaccgcatcgggcgtactgctcgtgcaggcgaaagcggcctg
gcgattagcctgtgcgctccagaagaagcacagcgtgccagtgtgttagctgaaatgctg
aatttgtctctgaactggcaaccagccccaacgggcggcagcattaagccgcttgaagcg
accatgactacactctgcatcgatggtggcaagaaagcgaaaatgcgtccgggtgatatc
ctcggtgcattgaccggtgatatggggctggatggtgcggatatcggtaagattgatgtt
catccaatgcacgtttatgtcgcggttcgtgaatccgttgcacgtcatgcctggaagcaa
ttgcagcagggtaaaatcaaaggcaaatccgttaaagttcgtttgttgaagtaa
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