Buttiauxella sp. 3AFRM03: D8682_03635
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Entry
D8682_03635 CDS
T05676
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
buf
Buttiauxella sp. 3AFRM03
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
buf03016
]
D8682_03635
Enzymes [BR:
buf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
D8682_03635
Transfer RNA biogenesis [BR:
buf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
D8682_03635
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
AYN26163
UniProt:
A0A3G2I9X1
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All DBs
Position
515132..517066
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDSQKSYFIPPPQMKKVMHGDRV
SAVIHTDKDRETAEPEELIEPFLSRFVGRVQRKDDRLSIVPDHPLLRDAIQCRADRNVTH
DFQNGDWAVAEMKRHPLKGDRAFYAELTQFITFGDDHLAPWWVTLSRHNLEREAPNGVST
EMLDEGLVREDLTALDFVTIDSASTEDMDDALYVEELADGKLQLTVAIADPTAWIAEGSK
LDGIAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANVTRPVVACRMVIAQDGSIDEGINF
FVATIESKAKLAYEDVSDWLEEKGDWQPPGDAIAKQIRLLERVCLSRAEWRRTHALVFKD
RPDYRFVLGEKGEVLDIVAESRRIANRIVEEAMIAANVCAAIVLREKLGFGVYNVHTGFD
PANIDQLANMLQGHGLEVDAQEVLTLNGFCKLRRELDAQPTSFLDSRIRRYQSFAEISTE
PGPHYGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETATRPQDEITVQMAERRRLNRM
AERDVGDWLYARFLQDKAGTDTRFAAEIIDVSRGGMRVRLIENGAVAFIPAPFIHSVRDE
MVCSQELGTVQIKGEVAFKVTDVIDVTIAEVRMETRSVIARPAI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagcttaaacagcaactgcattcccaaactcca
cgcgttgaaggcgtggttaaaggcacggaaaaaggctttggcttcctcgaagtggattcc
cagaaaagttactttattccgcctccgcagatgaaaaaagtgatgcacggtgaccgcgtg
agcgcggtgattcataccgacaaggaccgcgaaaccgctgagccagaagagcttatcgaa
ccgttcctcagccggtttgttggccgtgtacaacgtaaagacgaccgcctgtctatcgtg
ccggatcatccgttattacgtgacgcgattcagtgtcgtgcggatcgtaacgtgacgcat
gatttccagaatggcgactgggccgtggctgaaatgaagcgccacccgctgaaaggcgat
cgcgctttttacgctgaattaacgcagttcattaccttcggcgacgatcatcttgccccg
tggtgggtgacactgtcgcgccacaatctggaacgcgaagcacctaacggtgtgtcgact
gaaatgttagatgaaggcctggtgcgtgaagatttaaccgcccttgatttcgtcaccatt
gatagcgccagcacggaagatatggatgatgcgctgtacgttgaagaactggccgacggc
aaattgcaactgacggttgccattgctgaccctaccgcctggattgctgaaggcagcaag
cttgacggcatcgccaaagttcgcgcattcaccaactacctgccgggctttaacatcccg
atgctgccacgtgaattatctgatgacctgtgttcattacgtgccaacgtcacgcgcccg
gttgtcgcttgccgcatggttatcgcgcaagacggcagtatcgatgaaggcattaatttc
ttcgtcgccaccatcgaatctaaagccaaactggcctatgaagatgtatccgactggctg
gaagaaaaaggcgactggcagccgccaggtgacgccattgccaaacaaatccgtttgctg
gaacgcgtttgtctgagccgcgctgaatggcgtcgtacgcatgcactggtgttcaaagat
cgccctgattaccgctttgtattaggtgaaaaaggcgaagtattggatatcgtcgctgag
tcgcgtcgtattgcgaaccgcatcgttgaagaagccatgattgccgccaacgtctgtgca
gccattgtattgcgtgaaaagctcggttttggcgtttataacgtccataccggttttgac
ccagctaacattgatcagctcgcaaacatgttgcaaggccacggtctggaagttgacgcc
caggaagtgctgacgttgaacggcttctgtaaactgcgccgtgagcttgatgcacaacca
accagtttccttgatagccgtattcgtcgttaccagtcatttgctgaaatcagcactgaa
cctggtccgcattacggtcttggcctcgaagcttacgccacctggacttcaccgattcgt
aaatacggcgatatgatcaaccatcgtctgttaaaggcgatcatcaaaggtgaaaccgca
acgcgtccgcaagatgagatcacggtacagatggcggagcgccgtcgcctgaaccgtatg
gcagaacgcgatgtcggcgactggttatatgcgcgcttcctgcaagataaagcgggaacc
gacacacgctttgcagctgaaatcattgatgtcagccgtggcgggatgcgtgtacgcctg
attgaaaacggcgcggtagccttcatccctgcgccattcattcactctgttcgtgatgaa
atggtgtgcagccaggagcttggtacagtgcaaattaaaggtgaagtcgcctttaaagtg
actgacgttatcgatgtaactatcgccgaagtgcgtatggaaacgcgtagcgtgattgcc
cgtccagcaatttaa
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