Buttiauxella sp. 3AFRM03: D8682_03640
Help
Entry
D8682_03640 CDS
T05676
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
buf
Buttiauxella sp. 3AFRM03
Pathway
buf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D8682_03640
Enzymes [BR:
buf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
D8682_03640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
GGDEF_2
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AYN26164
UniProt:
A0A3G2I9T7
LinkDB
All DBs
Position
517368..519359
Genome browser
AA seq
663 aa
AA seq
DB search
MKDDLEQNLLYRYLGTTSPYWRLPTDSNALQLAASEDSDVSQVIALDPEQAEQIRQMTVI
TSSVTMSISLFGSEVSVHLVGRKVSKKEWAGTASAWNDTPSVARDLVQGLSFAEQVVSEA
NSVIVILDRLGNIQRFNRLSEEYTGLKEQDVIGQNVFKLFMSRSEAAASKRNISGFFLNG
NSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAINDLITAAIDNRGETQAGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLDDGQILARLGGDEFIVLATDTSQATLEAMSSRILTRLKQPFRIGLIEVYTGCSLGI
SLAPQHGEDRESVIRNADTAMYTAKESGRGKFCVFSPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKMTWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVMLSVV
QQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPIDVELTESCLIENE
ELALSVIQQFSRLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQSVSQSLV
RAIVAVAQALNLQVIAEGVENQKEDAFLTKNGVNERQGYLFAKPMPAAVFERWLKRYQAR
TAR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgatttggagcagaatctgctctaccgttatttagggacaaccagcccatat
tggcgtttgccaaccgatagcaatgcgctgcaattagcagccagcgaagattcagatgtg
agtcaggtcatcgctttggatcccgaacaggcagagcaaatccgccaaatgacggtgatt
acctcaagcgtaaccatgtcaatttctttgtttggcagcgaagtttctgtccatctggta
ggacgaaaagtatcaaaaaaggagtgggccggtacggcctcagcatggaatgatacccct
tctgttgcgcgtgatttagtacaaggcctctcttttgcagaacaggtggtttctgaggca
aactcggtgatcgtcattctcgaccgattagggaatattcagcgcttcaatcgcctgagt
gaagaatataccggtcttaaagaacaagatgtcattgggcaaaacgtctttaaattattc
atgagccgtagtgaagccgccgcatccaaacgcaatattagcggtttctttctcaacgga
aactcttacgaagtcgaacgctggataaaaacccgcaaaggacagcggctatttttgttt
cgcaataaattcgtccacagtggcagtggcaagaacgaaatctatctgatttgttctggt
accgacattaccgaagaacgccgcgcacaagaacgcctgcgagtgctggcaaataccgat
acgattaccggccttcccaatcgcaatgccattaatgacctcatcactgccgctatcgat
aatcgcggtgaaactcaggctggcatcgtttatctggacctcgataactttaaaaaagtg
aacgatgcttatggccatatgtttggcgatcagcttttgcaggcggtgtcgttagcgatt
ttgagttgtcttgatgatgggcaaattctggcccgccttgggggtgatgagtttattgtt
ctggctactgacacttcgcaagccactctggaagcgatgtcgtcgcgaattttaacccgc
ctgaagcaacctttccgtatcgggttaattgaagtttacaccggttgttcgttaggtatt
tcgctggctccccagcatggtgaagaccgggaaagcgttattcgcaacgcagataccgcg
atgtataccgcaaaagagagcgggcgcggcaagttctgtgtcttctcaccggaaatgaat
cagcgggtctttgaatacttgtggctcgataccaacttacgtaaagcgctggaaaacgat
cagctggttattcactaccagccgaaaatgacctggcgcggcgaagtcagaagcctggag
gcgttggttcgctggcaatcgccagagcgtggtttgattccaccactggacttcatttcc
tatgcagaagagtccggtttgattgttccgcttggccgctgggtaatgttgagcgtggtt
caacaggtggcgaaatggcgtgataaaggtatcaacttacgcgtcgcggtgaacgtgtct
gcacgccagttagcagaccaaacaatctttagcgatttgaagcaagcactcaaagatctc
aactttgagtactgccctatcgatgtcgaactcacagaaagctgcttgattgaaaacgaa
gagttagccctttcggtgattcagcagttcagtcgtcttggtgcccaggtgcatttggat
gactttggaacgggttattcctcgctttctcaactcgctcgtttcccgattgatgccatt
aaactcgaccaaagtttcgtgcgcgatattcataagcaatctgtttcccagtcgctagtg
cgtgccatcgttgcagtggcgcaggctttgaatttgcaggtgattgctgaaggggtggaa
aaccaaaaagaagatgcctttctgactaagaatggtgtcaacgaacggcaaggttatctg
tttgcgaaacccatgcccgcagccgtattcgaacgttggttaaaacgttatcaagccaga
actgcacgttaa
DBGET
integrated database retrieval system
