Buttiauxella sp. 3AFRM03: D8682_10585
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Entry
D8682_10585 CDS
T05676
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
buf
Buttiauxella sp. 3AFRM03
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buf03400
]
D8682_10585 (sbcC)
DNA repair and recombination proteins [BR:
buf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D8682_10585 (sbcC)
Archaeal homologous recombinant proteins
D8682_10585 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_29
nSTAND3
ABC_tran
cobW
ABC_ATPase
NTPase_1
AAA_14
Chalcone_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AYN27385
UniProt:
A0A3G2IDZ7
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All DBs
Position
1950995..1954150
Genome browser
AA seq
1051 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAVCLALYHKTPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGVAYRAFWSQNRARNAANGNLQAPRVELAEVE
SGKIIADKVKDKLDITAKLTGLDYDRFTRSMMLSQGQFAAFLNADANDRASLLEELTGTE
IYGTVSAAVFENHKNVRSQLENLQAQAAGVALLDESQRQQLSESLQALTTEEKNRLAEQQ
TLQQHQQWLSQLDLLTQKHSHAGTALNAATRAIEEAAPLLEKLTRAQPAEKLRPDWQRLQ
ELQATLQNTRVQSEEVNTRLHQATVRRQQTRQAAASQAAKLAHENSELQAWLKTHDRYRL
WGAELAGWRMAFNQQQRDASQLQTLQRDIETSQKKLELLPAVELTLTADEVSTHLQATIT
ARPLRQQLAALQPQLASLHKRKIQQQQDITALEKQITQGDVELALKRQQYKERRQHESDL
EKVCELEMRIVSLEAERAHLQPDQPCPLCGSTQHPAVADYQAIQPGENQQRLTALKREVA
SLAEAGFAMKGQLDTLRSQRENLVVAIKTLDEEEKALRLRWQQLCASLQLALKPEDDLQQ
WLESEEKREQQLHQLSQRIVLEEQLARTRLQHSKLAAEAAAQRETLNSVLENAGLQHPAH
GEEHSWLEQRQQESQSWQQRNEQLPRLQQQLNALENLLNALIDDGTTPAPLSESEQISAL
QNWHNLHSDCIALESQWKTLQQQLQQEEARVSQANEQFLSTLAASQFADAPSFQAALLDE
SERQQLEQKKQHLEQQHQQQTILCQQAEKALTDHKAARPTTLADDAELSLLDAQLTLCNQ
QLRENTTQQGQIQQQLRHDAENRLRQQGLMQSIVECQQQVEDWGYLNALIGSKEGDKFRK
FAQGLTLDNLVWLANNQLNRLHGRYLLQRKDSEALELQVVDTWQADAVRDTRTLSGGESF
LVSLALALALSDLVSHKTRIDSLFLDEGFGTLDAETLDTALDALDTLNASGKTIGVISHV
EAMKERIPVQIKVKKINGLGVSRLAKEFAVE
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagtctgcgattgaaaaacctcaactccctgaaaggggaatggaaaatt
gatttcacccgcgagcctttcgccagcaatggtttgtttgccatcaccgggccaacagga
gcgggtaaaactacgctacttgatgctgtctgcctcgcgctttatcacaaaacgccacgt
ctcaacacggtctcgcaatcacagaatgacctgatgacccgcgacactgccgagtgtctg
gcggaagtggaatttgaagtaaaaggtgttgcctaccgcgcattctggagccagaaccgg
gcgcgtaatgcggccaacggcaatctgcaagccccgcgcgttgagctggctgaagtagaa
agcggcaagatcatcgccgataaagtgaaagataagctcgatatcaccgccaaattgacc
ggactcgattacgaccgcttcacccgctccatgatgctttctcaggggcagtttgcggcg
tttttaaatgccgacgccaatgaccgtgcctcattgcttgaagaactcaccggtactgaa
atttacggtacagtttctgcggcggtgttcgaaaatcataaaaatgtacgcagccaatta
gagaacctgcaagcgcaggcagcaggtgtagcacttctggatgaatcccagcgccagcag
ctttcagagagtttgcaggcacttactacagaagaaaaaaaccgcctggctgaacagcag
acactccagcaacaccagcaatggctcagccaactcgacctgttgactcaaaaacactcg
catgcgggaacggcactgaatgcggcaactcgcgcaatcgaagaagcagcgccgcttctc
gaaaaactaacacgagcccagcccgcagaaaaactgcgccctgactggcaacgcttgcag
gaattacaggccacgctgcaaaacacccgcgtacaaagcgaagaagtgaatactcgctta
catcaggcgacagtgcgtcgccagcagacccggcaggccgccgcaagccaggcagcaaaa
ctggcgcatgaaaacagcgagctgcaagcctggctgaaaacgcatgacaggtaccgcctg
tggggcgctgaacttgcaggctggcgcatggcattcaatcaacaacaacgcgatgccagc
cagctacagaccttgcagcgtgatattgaaactagccagaaaaagctggaactgctgcca
gccgttgagcttacgctcactgctgatgaagtgagtactcatttacaagcaacgattacc
gcgcgccctttgcgccagcagcttgctgctttacagccgcaacttgcctcacttcacaag
cgaaaaatccagcagcaacaagatattactgcgcttgaaaaacagatcactcaaggcgat
gtcgagctggcactcaaacgccagcaatacaaagagcgccgccagcatgaaagtgacctg
gaaaaagtatgcgaactggaaatgcgcattgtcagtctcgaagctgaacgcgcccatttg
caacccgatcaaccttgcccgctgtgtggttccacgcagcatccggcagtggcggattat
caggccatacagccaggagaaaatcagcagcgtctgacggcactaaaacgtgaagttgcc
agccttgcggaagctggttttgcgatgaaaggccaactcgacacgttgcgttcacagcgc
gaaaacctggttgtcgccatcaaaacgcttgatgaagaagagaaggcattacgtctacgc
tggcagcaactgtgcgccagcctgcaactggcgctgaagcccgaggacgacctccagcag
tggctggaaagcgaagaaaaacgcgagcagcagctgcatcaactcagccaacggatcgtg
ctggaggagcaactcgctcggacgcgtctgcaacacagcaaactagcggcagaggccgcg
gcacaacgagaaacactcaatagcgtgctcgaaaatgctggcctacaacatcccgctcac
ggtgaagaacatagctggctggaacagcgccaacaggaatcccaaagctggcaacagcgc
aatgaacaacttccacgtttacaacagcaactaaacgccctggaaaacctgctcaatgcg
ctgattgatgatggcaccacgcctgctccgctatccgaaagcgaacaaatttcagcgttg
caaaactggcataacttgcacagcgactgtattgcgctggagagccagtggaagacgctg
caacagcagttgcaacaggaagaagcccgcgtgagtcaggcaaatgagcagttcctgtcc
acccttgccgctagccagttcgccgatgcaccgtcattccaggcagcattactcgatgaa
agtgaacgccagcaacttgagcagaaaaaacagcatcttgagcaacagcatcagcagcaa
accattctttgccagcaagctgagaaagcgctcactgaccataaagcggctcgcccaact
acgcttgctgacgatgcagaactgagtttgctggacgcacaattaacgctgtgtaatcag
caactgcgcgagaacaccacgcaacaaggacagattcagcaacagcttcgccatgacgca
gaaaatcgcctacgccagcaagggctgatgcagtccatcgtcgagtgccagcagcaagtt
gaagactggggctatctcaatgcgttaattggttcgaaggaaggcgataaattccgtaag
tttgcccaggggctaacgctcgataatctggtgtggttggcgaacaaccagctaaaccgt
ttgcatgggcgttatttgttacaacgcaaagatagcgaagctctggaattgcaggtggtc
gatacatggcaggccgatgcggtgcgcgacactcgcacgctttcaggtggtgagagtttc
ctggtcagcctggcgctggcgctggcgttatccgacctggtgagccacaaaacccgcatc
gactcgctgttccttgatgaaggctttggcacgctggatgcagagacactggacaccgcg
ctggatgcgttagatacgctcaatgccagcggcaaaaccatcggcgtgataagccacgtt
gaggcaatgaaagaacgtattccggtacagattaaggtgaagaagatcaacggattgggt
gttagccgcctcgctaaggagtttgctgtcgagtaa
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