Buttiauxella sp. 3AFRM03: D8682_14580
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Entry
D8682_14580 CDS
T05676
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
buf
Buttiauxella sp. 3AFRM03
Pathway
buf03420
Nucleotide excision repair
buf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D8682_14580
03430 Mismatch repair
D8682_14580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buf03400
]
D8682_14580
Enzymes [BR:
buf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D8682_14580
DNA repair and recombination proteins [BR:
buf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D8682_14580
MMR (mismatch excision repair)
Other MMR factors
D8682_14580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
PhoH
DEAD
Motif
Other DBs
NCBI-ProteinID:
AYN28094
UniProt:
A0A3G2IF50
LinkDB
All DBs
Position
complement(2808329..2810491)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAATRSNMLVLAGAGSGKTRVLVHRIAWLISVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDDKQWPARQAMWFINGKKDEGLRPHHIESYGNPVEQTWQKIYQAYQEA
CDRAGLLDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNSIQYAWIRMLAGET
GKVMIVGDDDQSIYGWRGAQVENIQRFLTDFPGAQTIRLEQNYRSTNNILNAANALIANN
SGRLGKELWTDGSDGEPISLYCAFNELDEARFVVNRIKTWQESGGALEHCAILYRSNAQS
RVLEEALLQVGMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDQQLTMWQACRLLLQEKALAGRAASALQRFMELIDALAHETIDMPLHVQ
TDRVIKDSGLMMMYEQEKGEKGQTRIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPENCVEEVRLRASISRPVSHKRMG
TPISENDSGFTLGQRVRHAKFGEGTVVNLEGSGEHSRIQVAFPGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaatgacaaacagcgcgaagccgtcgcagcc
acgcgaagcaacatgctagtgttggccggggcgggcagtggtaagacacgcgtattggtg
caccgtatcgcctggttgattagcgtcgaaaattgctcgccgtactccattatggcggtg
acgtttaccaacaaagcggcagcagaaatgcgccaccgtatcggccagttgatgggcacc
agccagggcggcatgtgggtcgggactttccacggtcttgcgcaccgcttactgcgcgcg
catcacatggatgccaacctaccgcaggatttccaaatcctcgatagcgaagatcagctg
cgtttgttaaagcgcctgatcaaagccatgaatctcgatgacaaacagtggcctgcacgc
caggcgatgtggtttatcaacggcaaaaaagacgaaggtttacgccctcatcacattgaa
agttacggcaatccggttgagcaaacctggcaaaaaatttaccaggcttatcaggaagcg
tgcgatcgtgcgggtttgctggattttgccgagctgctgctgcgcgcgcatgaattgtgg
ctgaacaaaccacacattcttaaccactaccgcgagcgctttaccaacattctggtggat
gaattccaggataccaacagcatccagtatgcgtggattcgcatgctggcgggtgaaacg
ggcaaagtgatgatcgtcggtgacgatgaccagtcaatctacggctggcgcggcgcgcaa
gttgaaaacatccaacgttttctgaccgactttcctggcgcacaaaccattcgccttgaa
caaaactaccgctcgaccaacaacattctgaatgctgccaacgccctgatagccaacaac
tctggtcgtctgggtaaagagctatggacggatggcagtgacggtgagccgatctcactg
tattgcgcatttaacgaattagacgaagcgcgttttgtggttaaccgcatcaaaacgtgg
caggaaagcggcggtgcgcttgagcactgtgcgattctctatcgcagtaacgcccagtcg
cgtgtactggaagaggcgttattacaggtcggtatgccataccgtatctatggcggcatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcctatctgcgcctgattgccaac
cgtaacgacgatgcggcgtttgaacgcgtggttaacacgccaacgcgtggcatcggtgac
cgcacattagacgtggtgcgccaaacgtcgcgcgaccagcaactgacaatgtggcaagcc
tgccgtttgttgctgcaggaaaaagcgctggcggggcgtgctgcttctgctctgcaacgc
tttatggagcttatcgacgcgctggcacacgaaaccatcgatatgccgctgcacgtccaa
accgatcgggtgattaaagactcgggtttgatgatgatgtacgagcaggaaaagggcgag
aaaggccagacgcgcatcgaaaacttagaagaactggtcacggcaacgcgccagttcagc
tatcaggatgaagatgaagacttgatgccgttgcaggcattcttgtctcatgcagcactt
gaagccggcgaagggcaagccgatacctggcaagatgcggtgcaattgatgacgctgcac
tcggcgaaagggctggaattcccgcaagtgtttatcgtcggcatggaagaaggcatgttc
ccaagtcagatgtcgctggatgaaggtggccgcctggaagaagaacgccgcctggcgtac
gttggcgtgacgcgtgcaatgcaaaaactcacactgacctacgctgaaacccgccgcctg
tatggcaaagaggtttatcaccgcccgtcacgcttcgttggtgaactgccagaaaactgc
gtagaagaagttcgcctgcgagccagcatcagccgcccggtcagccataaacgcatgggc
acgccaatctctgaaaatgattctggctttaccctcgggcagcgtgtgcgccatgccaaa
tttggtgaagggacggtcgttaaccttgaaggcagtggtgaacatagccgaatccaggtg
gcattccctgggcaagggattaagtggttagtcgccgcttatgcgcgactggaaacggtg
taa
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