Buttiauxella sp. 3AFRM03: D8682_14715
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Entry
D8682_14715 CDS
T05676
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
buf
Buttiauxella sp. 3AFRM03
Pathway
buf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D8682_14715 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buf03021
]
D8682_14715 (rho)
03019 Messenger RNA biogenesis [BR:
buf03019
]
D8682_14715 (rho)
Transcription machinery [BR:
buf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
D8682_14715 (rho)
Messenger RNA biogenesis [BR:
buf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D8682_14715 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA_22
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AYN28115
UniProt:
A0A3G2IG08
LinkDB
All DBs
Position
complement(2833846..2835105)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENQARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNEDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaaccaagcccgtatgcgcaagcaggacattattttctccatcctgaag
caacatgctaagagtggtgaagatatctttggtgacggtgtgctggagatattgcaggac
ggatttggtttcctccgctctgcagacagctcctacctcgccggtcctgatgacatctac
gtttctcccagccaaatccgccgtttcaacctccgcacaggggataccatctccggtaag
attcgcccgccgaaagaaggtgagcgttactttgcactgctgaaagtaaacgaagtcaac
tatgacaaaccggaaaatgcgcgtagcaaaatcctgttcgaaaacttaaccccgctgcat
gcgaactctcgtttacgcatggaacgtggtaacggttctaccgaagacttaaccgcacgc
gtactggatctggcatcgccaatcggtcgcggccagcgtggcctgattgtggcaccgccg
aaagctggtaaaaccatgctgctgcaaaacattgctaccagcattgcgtataaccatcct
gattgtgtactgatggttctgctgattgacgagcgtccggaagaagtgaccgagatgcag
cgtctggttaaaggtgaagttattgcttctacctttgatgagccagcctcgcgccacgtt
caggttgccgaaatggtcatcgagaaagcaaaacgtctggttgagcacaagaaggacgta
attattcttctcgactccatcacccgtctggctcgtgcctacaacaccgtggtaccggca
tctggtaaagtgttaaccggtggtgtggacgctaacgccctgcatcgtccaaaacgcttc
ttcggtgctgcacgtaacgtggaagagggtggtagcctgactatcatcgcaacggctttg
gttgataccggttctaaaatggatgaagttatctacgaagaatttaaaggtaccggcaac
atggaactgcatctggcgcgtaaaatcgctgagaagcgtgtgttccctgccatcgactat
aatcgttctggtacccgtaaagaagaattgctgactacccaggaagaactgcagaaaatg
tggatcctgcgtaaaatcatccacccaatgggtgagattgatgccatggaattcctcatc
aacaagctggcgatgacgaaaaccaacgaagacttcttcgatatgatgaaacgctcgtaa
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