Buttiauxella sp. 3AFRM03: D8682_17495
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Entry
D8682_17495 CDS
T05676
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
buf
Buttiauxella sp. 3AFRM03
Pathway
buf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D8682_17495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buf03021
]
D8682_17495
03400 DNA repair and recombination proteins [BR:
buf03400
]
D8682_17495
Enzymes [BR:
buf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D8682_17495
Transcription machinery [BR:
buf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D8682_17495
DNA repair and recombination proteins [BR:
buf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D8682_17495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AYN28618
UniProt:
A0A3G2IGQ9
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All DBs
Position
3436054..3437043
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDDVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactcttggt
aatgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgacagaggttgag
attgatggtgtactacacgagtacagcaccaaagaaggcgttcaggaggatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcaaggtaaagatgatgttattctt
actctgaataagtctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcatgtgatctgccacctgaccgatgagaacgcatctatt
agtatgcgtatcaaagttcagcgcggtcgcggttacgtgccggcctctgcccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctggtcgacgcctgctacagccctgta
gagcgaattgcctacaatgttgaagctgcgcgtgtagaacagcgcaccgacctggataag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccattctggctgaacaacttgaagctttcgttgatttacgtgatgtacgtcagcca
gaagttaaagaagagaaaccagaattcgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactatatcggtgat
ctggtacagcgtaccgaagttgagctgctcaaaacgcctaacttgggtaaaaaatctctt
actgagattaaagatgtgctggcttcccgtggtttgtctctgggcatgcgcctggaaaac
tggccaccggcaagcatcgctgacgagtaa
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