KEGG   Buttiauxella sp. 3AFRM03: D8682_17780
Entry
D8682_17780       CDS       T05676                                 
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
buf  Buttiauxella sp. 3AFRM03
Brite
KEGG Orthology (KO) [BR:buf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:buf03019]
    D8682_17780 (csrD)
Messenger RNA biogenesis [BR:buf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     D8682_17780 (csrD)
SSDB
Motif
Pfam: EAL GGDEF GAPES4 GDPD NADH5_C
Other DBs
NCBI-ProteinID: AYN28664
UniProt: A0A3G2IGR1
LinkDB
Position
3481576..3483516
AA seq 646 aa
MRLTTKLSAFMTLLTGLAIFVTLVGCSLSFFNAMHFKVHQRVVAVATIIDNDLVSSSPEE
LINRLNEVMVPIDITEVKFKIGGNTVYQHQLSQSYRLLGNSYSFRTVTVELMKHPGMFLS
LTYRDPVANYYNSLFTTVPLSITVGFMLIVLFFAIRWMKKQLAGQELLENRARRILNGER
GVEVRGSVLEWPPKASSALDLLLSDLQNANDQRSRMDTLIRAFAAQDAKTGLNNRLFFDN
QLATLLDEQEQVGAHGVVMIIRLPDFDTLHETWGRAAVEEYLFTLINLLSTFVMRYPGAL
LARYFRSDFAVLLPHRTLKEADSIASQLLKAVDTLPPTRMLDRNDMMHIGICAWRSGQTK
EQVMENAEVATRNASLQGANSWSVYDDSLPEKGRGNVKWRTLIEQVLQRGGPRFYQKPAV
MRNGYVHHREIMCRIFDGEQEVLAAEYLPMVKQFGLAEQYDRQTIARLLPLAGFWPEETL
AIQVSVESLIRAPFQRWLRDALMQSEKSLRRRILFELAEADVCQHISRLQPVIRLIKALG
ARIAVSQAGLTVVSASYIKELDVELIKLHPGLVRNIEKRTENQLFVQSLVEACNGTQTQV
FAVGVRTRSEWQTLVEKGVAGAQGDFFAASQPLDSNVKKYSQRYSV
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgcgattaacgacgaaactttctgcttttatgacgttgctgactggcctcgctattttt
gtgacgctcgtgggttgttcattaagcttctttaatgcgatgcattttaaagttcatcag
cgtgtggtggcggttgccacaatcattgataacgatttggtttcaagctctccagaagaa
ctgatcaatcgcctcaacgaagtgatggtgcccattgatatcaccgaggtgaaattcaaa
ataggcggcaacacggtttaccaacatcagttgagccaatcctaccgtttactgggcaat
agctacagttttcgtaccgtgactgttgagttaatgaagcatccggggatgttcctctct
ctcacctatcgggatcctgtcgcgaattactacaactcacttttcactaccgttccactt
tctatcacggttggcttcatgcttatcgtgctgttttttgctatccgctggatgaaaaag
cagctcgccgggcaagagttactggagaaccgagcgcgacggattctgaacggtgaaaga
ggcgttgaggtgcgcggatcggtactggaatggcctccgaaagccagtagcgctttggac
ttgttgctttccgatctgcaaaacgcgaacgatcaacgcagcagaatggacaccttgatt
cgtgcttttgcggcgcaggatgcgaaaacaggcctgaataatcgtctgttttttgataat
caactggcgacgttgctggatgaacaagagcaagtgggcgcgcatggtgtagtgatgatc
atccgtctgcccgattttgacaccctgcatgaaacatgggggcgcgcggcggtagaggag
tacttatttaccctcatcaatctgttgtcgacatttgtgatgcgttatcccggcgcatta
ctggcacgttatttccgcagcgattttgccgttttgttacctcatcgcacattaaaagaa
gccgatagtattgccagccagttgctgaaagccgttgataccttgccgccaacccgaatg
ctcgaccgcaatgacatgatgcatatcggtatttgtgcatggcgtagcgggcaaaccaaa
gagcaggtgatggagaacgcggaagtcgcgacgcgtaatgcttcgttgcaaggggcgaac
agttggtcggtctatgacgatagtttgccggaaaaagggcgcggcaatgtgaaatggcgt
acgctcattgagcaagtgttacagcgcggtggcccacgcttctatcaaaaaccggcggta
atgcgtaatggctacgtacatcatcgtgaaatcatgtgtcggatttttgacggcgaacaa
gaagtgctggcggcagaatatttgccgatggtgaagcagtttggtttagcggaacaatat
gaccggcaaaccatcgcccgattgttacctttagccggtttctggcccgaagaaacactg
gctattcaggtgtctgtagaatcactgattcgcgctccgttccagcgttggttgcgtgat
gcgttgatgcagtcagaaaaatcgcttcgacgacgtattctttttgaacttgcagaggca
gatgtctgtcaacacatcagccgtttgcagcctgtgattcgcttgattaaagctttgggt
gctcgtattgctgtctcccaggcgggtttgaccgtagtgagcgcttcttatattaaggag
ttggatgtggagttgataaagctgcatccggggctcgtgcgaaacattgagaaacgaact
gaaaatcagttgtttgtacagagcctggttgaggcctgtaatgggactcagacgcaagtt
tttgcggtcggagtcagaacgcgaagtgaatggcagacactggtggagaaaggcgtggcg
ggtgctcaaggtgatttttttgcggcatctcaaccactagacagcaacgtgaaaaaatat
tcgcaaagatactcggtttaa

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