Buttiauxella sp. 3AFRM03: D8682_19185
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Entry
D8682_19185 CDS
T05676
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
buf
Buttiauxella sp. 3AFRM03
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buf03021
]
D8682_19185 (rapA)
Transcription machinery [BR:
buf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
D8682_19185 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AYN28917
LinkDB
All DBs
Position
complement(3782462..3785368)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDPRMVTLLYPATGENRLYARNDSPITRVMFNPGDT
ITSHEGWQLKVDEVKEENGLLAYIGTRLDTEETGTMLREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRSRVYQSEQYRQPWSGLRGMRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLAGSAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DSDNPFETEQLVICSLDFVRRSKQRLEHLCEAEWDLMVVDEAHHLVWSEKAPSREYQAIE
QLAEHVLGILLLTATPEQLGMESHFARLRLLDPSRFHDFEQFVEEQQHYRPVADAVALLL
AGNHLTNDQLNMLSELIGEQDIEPLLQTANSNREGSDAARQELISMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIRLPLPMQYQTAIKVSGIMAARKSVEERARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVKWFHEGLDAFEHTCPTGRTIYDSVYPQLIEYLAAPENT
DGFDALIKQCREQHDALKIQLEQGRDRLLEIHSNGGEKSQALAESISEQDNDTNLVSFAL
NLFDIVGINQDDRGDNMVVLTPGDHMLVPDFPGLPEDGCTITFERDVALSREDAQFVTWE
HPIIRNGLDLILSGDTGSCALSLLKNKALPVGTLLLELIYVVEAKAPKQLQLNRFLPPTP
VRMLVDKNGTNLAAQVEFESFNRQLSTVNRHTGSKLVNAVQQDVHAILQLAEEKVEAAAQ
VLIKAAREEADEKLSSELSRLEALKAVNPNIRDDELEAIESNRQQVLESLAQANWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgttggatcagcgacaccgaaagcgaactgggactggga
actgtggtcgctttagacccacggatggttaccttgctctaccctgccaccggtgaaaat
cgcctgtatgccagaaatgactcgcctatcacccgtgtgatgtttaacccaggcgacacc
attaccagccatgaaggctggcaactaaaagttgatgaagttaaagaagaaaacggctta
ctagcctacattggtacgcgtctggacactgaagaaaccggtacgatgctgcgtgaggtt
ttcctcgacagcaaactggtgttcagtaagccgcaagaccgtctttttgccgggcaaatt
gacaggatggatcgtttcgctctgcgttaccgttcccgcgtctaccaaagcgaacagtat
cgccaaccatggagcgggctgcgcggtatgcgcaccagtctgattccacaccagttgaac
atcgcccacgatgttggccgtcgccatgcaccgcgcgtattactggctgatgaagtaggt
ttgggtaaaaccatcgaagccgggatgattctccaccagcaactgctggctggcagtgct
gagcgcgtattgattgtggtgccggaaaccctgcaacaccaatggctggttgaaatgctc
cgccgctttaacctgcgttttgctctctttgatgacgagcgttatgccgaagcccagcac
gacagcgataacccattcgaaacagaacaactggttatctgttcgctggattttgtgcgc
cgcagtaagcaacgtcttgagcacctttgtgaagctgaatgggatttgatggtggtcgat
gaagcccaccatttggtgtggagcgagaaggcaccaagccgtgaataccaggcgatagaa
cagctcgctgaacatgttctgggtatcttgctgttaaccgcaacgccggaacagctgggt
atggaaagccacttcgcgcgtctgcgtttgctggacccgagccgtttccacgatttcgag
caatttgttgaagaacagcagcattatcgcccggtagctgatgccgttgcactgctgctg
gcgggtaaccatctgactaacgatcagctcaatatgttgagtgagttgattggcgagcag
gatattgaaccgctgctgcaaaccgcgaacagtaaccgtgaaggtagcgatgcggctcgc
caggagctgatctccatgctgatggaccgccatggcaccagccgtgtgttgttccgtaac
acccgtaatggcgtgaaaggtttcccgaaacgcgaactgcataccattcgtttgccgctg
ccgatgcagtatcaaaccgcgattaaagtgtccggcattatggcggcgcgtaaatctgtg
gaagaacgcgctcgcgacatgctctacccggagcagatttatcaggaatttgaaggcgat
agcggcacgtggtggaacttcgatccgcgtgttgaatggctgatgggttacctgaccagc
caccgttctcagaaggtgctggtgatttgtgccaaagccgcgacagcattgcaacttgaa
caagttctgcgtgaacgcgaaggtatccgtgccgccgtgttccatgaaggcatgtccatc
atcgagcgtgaccgtgcagccgcatggtttgccgaagaagataccggcgctcaggtgctg
ttgtgttccgaaattggttccgaaggccgtaacttccagttcgccagccaactggtgatg
ttcgatctgccgtttaacccggatctgctggaacaacgtattggccgtctggaccgtatc
ggccaggcgcacgatatccagatccacgttccttatcttgagaaaaccgcgcaatccgtc
ctggtgaagtggttccatgaaggcctggatgctttcgagcatacttgcccaactggccgc
acaatttacgacagcgtgtatccgcaactgattgagtatcttgcagcaccggaaaatacc
gacggtttcgatgcgctgattaagcaatgccgtgaacagcatgatgcgctgaagattcag
cttgagcagggccgtgaccgcctgctagaaattcactccaacggcggtgagaaatcacaa
gcgttggctgagtccatttcggagcaggataacgacaccaacctggtgagttttgccctg
aacttattcgacatcgtcggcattaatcaggatgaccgcggcgacaacatggtggtgctg
acccctggtgatcatatgctggtgcctgatttcccaggtcttccggaagacggttgcacc
attacgtttgagcgtgatgtggcgttgtctcgcgaagacgcacagttcgtcacctgggaa
cacccgatcatccgcaacggcctggatctgattctgtctggcgacaccggtagctgtgcg
ttgtctttgttgaaaaacaaagcgttgccagtcggcacgttgctgctggagctgatttat
gttgttgaggcaaaagcgccgaaacaattgcagctcaaccgcttcctgccgccaacgcca
gtgcgtatgttggtggacaaaaatggcaccaaccttgccgctcaagtggagttcgaaagc
ttcaaccgccagctcagcacggtgaatcgccataccggcagtaagctggtgaatgcggtg
cagcaagatgtccacgctattttgcaattggcagaagagaaagtggaagccgcagcacaa
gtgttgatcaaagcggctcgtgaagaagctgatgagaagctgagttccgagctttcccgt
ctggaagcgctgaaagcggtcaacccaaacattcgtgacgatgaacttgaagctatcgag
agcaaccgtcagcaagtgttggaaagccttgcgcaagccaactggcgcctggatgcattg
cgtctgatcgtcgtgacacatcagtag
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