Buttiauxella sp. 3AFRM03: D8682_19620
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Entry
D8682_19620 CDS
T05676
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
buf
Buttiauxella sp. 3AFRM03
Pathway
buf03410
Base excision repair
buf03430
Mismatch repair
buf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D8682_19620 (recJ)
03430 Mismatch repair
D8682_19620 (recJ)
03440 Homologous recombination
D8682_19620 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buf03400
]
D8682_19620 (recJ)
DNA repair and recombination proteins [BR:
buf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D8682_19620 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D8682_19620 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D8682_19620 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AYN28998
UniProt:
A0A3G2IHQ5
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All DBs
Position
3877478..3879211
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AA seq
577 aa
AA seq
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MKQQTQLRRRTVDESVVLPQQLHPLLKRLYASRGVSGEQDLERSVKGMLPWQQLNGMDKA
VQILHDAFREGLRIIVVGDFDADGATSTALSVLGLRSLGCQNVSYLVPNRFEDGYGLSPE
VVDQAHARGAQLILTVDNGISSHSGVERAHALGIPVVVTDHHLPGPELPAAEAIINPNLV
DCEFPSKSLAGVGVAFYLMLALRAHLRDCGWFEQQGLVIPNIAELLDLVALGTVADVVPL
DTNNRILTWQGLSRIRAGKCRPGIKALLEVANREPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLSENIGEARMLANELDALNQTRKEIEQGMQVEALTLCQQLEHSHDELPYGLAM
YHPEWHQGVVGILASRIKERFNRPVIAFAPAGDGTLKGSGRSVQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEAKFEEFRQRFGDLVGEWLDPALLQGVVWSDGAISAQEMTLE
TAEMLRDAGPWGQMFPEPLFDGKFRLLQQRLVGERHLKVMVEPVGGGPLIDGIAFNVDTA
CWPDNGVREVELAFKLDVNEFRGNRSVQLLIDHIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacagcaaacacaacttcgccgtcgtacggtcgatgagtcagtggtgttaccccag
caactgcatccacttttaaagcgcctttatgccagtagaggcgtaagcggcgagcaagac
ctggaacgtagcgtgaaagggatgctgccgtggcagcaacttaatggcatggataaagcc
gttcagatactgcacgacgctttccgtgaaggcttgcgcattatcgtcgtcggtgacttt
gatgccgatggcgcaaccagcaccgctttgagcgtgctggggctgcgtagccttggctgc
caaaatgttagttacctggttcccaaccgctttgaagatggttacggcttgagtccagaa
gtggtggatcaggcgcatgcgcgtggcgcacaactgattctgaccgtcgataacggcatc
tcttcgcatagtggtgttgagcgtgctcatgcgctgggaattccggtggtggtcaccgac
caccatttgcctgggccggagcttcctgcggctgaagccatcatcaacccgaatctggtt
gattgcgagtttccgtcaaaatccctcgctggtgtgggcgttgccttttatctgatgctg
gcgctgcgtgcgcatttacgcgattgcggctggtttgaacaacaaggcctggtgattccc
aacatagcagaactgctggatctggtagcgctaggtaccgtggcagacgttgtgccgctt
gataccaataaccgtattctgacctggcaggggctgagccgtattcgtgctggcaaatgc
cgcccaggcattaaagctctgctggaagtcgccaaccgcgagccgcaaaagctggcggct
agtgatttgggctttgcccttgggccacgcctgaatgccgctggtcgtctggacgatatg
tccgtcggtgtggcgttattgcttagtgaaaacattggcgaagcccgcatgctggctaat
gaactggacgcgttaaaccagacgcgtaaagagattgagcagggcatgcaggttgaagcg
ctgacgctctgccaacagcttgaacacagccatgatgagttaccgtatggcctggcgatg
taccatcccgaatggcatcagggtgttgtcggtattctcgcctcgcgcattaaggaacgg
tttaaccgcccggttatcgcgtttgcgcccgcaggcgacggcactttgaaaggctcaggc
cgttcggtgcaaggtctgcatatgcgcgatgcccttgagcggcttgataccttgtatcct
ggcatgatgctgaaatttggcggtcacgcgatggcggctgggttatctcttgaagaagcg
aaattcgaagaattccgtcaacgctttggcgatttggttggggaatggcttgatcctgcg
ttgttgcaaggcgtggtttggtcagacggagcaatcagcgcgcaagaaatgacgctcgaa
accgccgagatgctacgcgatgccgggccgtgggggcagatgttcccggaacctttgttt
gacggtaaattccgtctattacagcaacggctggtgggcgagcgtcatcttaaagtgatg
gttgaaccggtcggtggtgggccattaatcgacggcatcgcctttaacgttgataccgcg
tgctggccggataacggtgtgcgcgaagttgagctggcctttaagctcgacgtaaacgag
tttcgcggaaatcgcagtgtccagttattaatcgaccatatttggccaatctag
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