Buttiauxella sp. 3AFRM03: D8682_20055
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Entry
D8682_20055 CDS
T05676
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
buf
Buttiauxella sp. 3AFRM03
Pathway
buf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D8682_20055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buf03019
]
D8682_20055
Messenger RNA biogenesis [BR:
buf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D8682_20055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AYN29076
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Position
3983481..3984011
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESPEQAMYRELFEEVGL
QRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLISSDNDINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMPLQEVAPPRNNAPAWRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgttggtatcgtaatctgtaatcggcagggt
caagtgatgtgggccaggcgttttggtcaacattcctggcagtttccgcaaggtggcatc
aatcctggcgaatccccggaacaggcaatgtaccgggagcttttcgaggaagtggggtta
cagcgaaaagatgtccgaatactcgcctcgacccgaaactggttacgttacaagttacct
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccagaaacaaaaatggttt
ctcttgcagttgatcagcagcgataacgatatcaatatgcaaaccagtagtaccccagag
tttgatggctggcgttgggttagctattggtatccggttcgtcaggttgtctcctttaaa
cgcgatgtttatcgtcgggtgatgaaagagtttgccagcgtcgtaatgccgctgcaggaa
gttgcgccaccacgtaataacgcgcctgcctggcgacgtaaaagaggttaa
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