Buttiauxella sp. 3AFRM03: D8682_20110
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Entry
D8682_20110 CDS
T05676
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
buf
Buttiauxella sp. 3AFRM03
Pathway
buf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D8682_20110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buf03400
]
D8682_20110
Enzymes [BR:
buf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D8682_20110
DNA repair and recombination proteins [BR:
buf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D8682_20110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
SH3_13
SLFN-g3_helicase
AAA_16
PhoH
nSTAND3
Herpes_Helicase
CbiA
MukB
AAA_28
TrwB_AAD_bind
T2SSE
SRP54
AAA_33
AAA
DUF6225
ATPase
UvrD_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AYN29086
LinkDB
All DBs
Position
4000290..4002125
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AA seq
611 aa
AA seq
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MKMSELLQQAVEQKLLRALDAQFAMIIAGDEQPAVMLAAALVSHDAGEGHVCIPLSRLTP
EFCFAGRQPDFAEQLFSLAALKSGWREALLASEAVSEHEGATPLKLIGERLYLNRMWQNE
VSVARFFGEENRVITLDGTQVIHVLNQLFEPMADIDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALVQLSDDKPLRIQLAAPTGKAAARLTESLGSALRRLPLDDAQKAALPND
ACTLHRLLGAQPNSQRLRYHAGNPLHLDVLVVDEASMVDLPMMAKLINAMPAHARVIFLG
DRDQLASVEAGAVLGDICHFVTHGYSPERATELSHLTGYSLPAGEGSQASVLRDGLCLLQ
KSYRFDSKSGIGQLAFAVNASDVKQAREVFSKGFGDISKQSLRETEDYARMIADTVEGYR
PYLELMRSHADPAVILDAFGRYQLLCALREGPFGVSGLNNRIELALIQKRLIERPNPTVS
RWYNGRPIMISRNDSSLGLFNGDIGIALDMGEGLRVWFPMPDGNIKSVQPSRLPGHETAF
AMTVHKSQGSEFEHAALVLPNQYTAVVTRELVYTAITRARNQLSLYADDRVLEKAIVTKT
ERRSGLMESFS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtctgagctgttacagcaggctgtcgagcaaaagctgttgcgcgcactcgat
gcgcagtttgccatgataattgccggtgacgagcaacccgccgtgatgctggccgccgcg
ttagtcagccatgatgccggtgaaggtcatgtctgcattcctctttctcgtttaacgccc
gagttctgttttgccgggcgacaacccgattttgcagagcaactgttttccctggctgca
ctaaagtccggctggcgcgaggcgctgcttgcttctgaagcagtgagtgagcatgaaggt
gctacgccgctgaagctgattggtgagcggctgtacctcaatcggatgtggcaaaacgaa
gtgtcggtagcacggttttttggtgaggaaaatcgtgttattactctcgacggaacacag
gtcatccacgttctgaatcaactgtttgaaccgatggctgatatcgactggcaaaaggtg
gcggcagctgtcgccctgacgcggcgcatttctgtgatttctggtgggccgggaaccggc
aaaaccactacagttgccaaattgctcgccgccctggtgcagctttcggatgacaaacct
ttgcgtatccaacttgcggcacccaccgggaaagctgcggcgcggctgacggaatcgctg
ggttcggccttgcgccgcttgccgctggatgacgcgcagaaagcggcattaccgaacgac
gcctgtacgctgcaccgcttactgggagcgcaacccaacagccaacgcttgcgttaccat
gccgggaatcctctgcatcttgatgtgctggtggttgatgaagcttcgatggtcgacttg
ccgatgatggcgaaattgatcaacgcaatgcctgcccatgcgcgcgtgattttcctcggc
gaccgtgaccaactggcttcagtagaagcgggtgcggtgcttggagatatatgccacttc
gtcacgcacggatattcaccggagagagccactgagttaagccacctgacgggctattca
ctgcctgcgggtgagggcagccaggcgagcgtattgcgtgatgggctttgtttgctgcaa
aaaagctaccgctttgatagcaagtccggcattgggcaactggcgtttgccgttaacgcc
agcgatgtgaagcaggccagagaggtcttctcaaaaggttttggtgatatttcgaaacag
tcgctccgtgagactgaagattatgcgcggatgattgccgacacggtggaaggttatcgg
ccctatcttgagttgatgcgtagccatgcagatcccgcggtgattcttgacgcctttggc
cgttatcagttgctgtgtgcgttgcgggaggggccgtttggcgttagtggcctgaataac
cgtatcgaactggcactgattcaaaaacgattgattgagcggccaaacccgacggtatcg
cgctggtataacggcaggccaattatgatttcccgtaacgacagttcgttggggttattc
aacggcgatattggtattgctctggacatgggggaggggctgcgcgtctggttcccgatg
ccggatggcaacatcaaatctgtgcagccgagccgtctgcctggccatgaaaccgcattc
gccatgacggtgcataaatctcaagggtcggaattcgagcacgccgcactggttttgcca
aatcaatacaccgcagtggtgacgcgtgagttggtctacaccgcaatcactcgtgctcgc
aatcaattgtctttgtacgccgatgatcgggtgttagaaaaagcgattgtaacgaagacg
gaacgtcgtagtggattgatggaaagttttagctag
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