Buttiauxella sp. 3AFRM03: D8682_23015
Help
Entry
D8682_23015 CDS
T05676
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
buf
Buttiauxella sp. 3AFRM03
Brite
KEGG Orthology (KO) [BR:
buf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buf03400
]
D8682_23015
DNA repair and recombination proteins [BR:
buf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
D8682_23015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
Zn_Ribbon_1
DUF7577
SLFN-g3_helicase
AAA_16
zf-tcix
DZR
AAA_22
AAA
UPF0547
Motif
Other DBs
NCBI-ProteinID:
AYN29588
UniProt:
A0A3G2IJ74
LinkDB
All DBs
Position
complement(4612900..4614660)
Genome browser
AA seq
586 aa
AA seq
DB search
MSFTLRPYQQEAVDATLTHFRKHITPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYRALGLEADIFAAGLQRKESHGKVVFGSVQSVARNLEQFHGEFSLLIVDECH
RIGDSDDSQYQQILTHLRTANPKLRLLGLTATPYRLGKGWIYHFHYHGMVRGNENALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQSQSNGLFSEADLNLELKQQKRITPH
IISQIIEFAADRRGVMVFAATVEHAKEVTALLPVNDAALITADTPGPARDTLIEAFKNQQ
FRFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKKDCLILDYAGNP
HDLFTPEVGAAKGKSDNVPVQVFCPSCGFANTFWGKTTSDGKLIEHFGRRCQGWFEDDDG
TREQCDYRFRFKNCPQCNAENDIAARRCHQCASVLVDPDDMLKAALKLKDALVLRCGGMT
LQHGGDEKGDWLKITYFDEDGTDVSERFRLQTPAQRMAFEQLFIRPHSRAPGVPLRWINA
ADVVAQQSALRHPDFVVARKNGNFWNVREKVFDYEGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttacactccgcccctaccaacaagaagccgtagacgccaccctcacccatttc
cgcaaacacatcacaccagcggtgattgtattgccgacgggtgcgggaaaaagcctggtg
attgctgagcttgcccgagtcgctcgcggacgggtgctggtgctggcacacgtcaaagaa
ctcgtggcgcaaaaccatgcgaaatatcgtgcacttggtctggaagccgatattttcgcc
gcgggtctgcaacgtaaagagagccacggcaaagttgttttcggtagcgtacagtcagtg
gcgcgcaatcttgagcaattccacggcgagttttcattacttattgtcgatgaatgccac
cgtattggtgattctgacgatagccaatatcagcaaatcctcacccatttacgcaccgcc
aatcctaagctgcgcctgttggggttgaccgctacaccttaccgtctggggaaaggctgg
atttatcattttcactatcacggtatggtgcgcggcaacgaaaatgcgctgttccgcgac
tgcatttacgaattaccgctgcgctacatgattaagcacggctatttaacaccgccggaa
cgcctggatatgccggtggtgcagtacgatttcagccgtttacagtcgcaatccaatggt
ttgttcagcgaagcggatcttaacctcgagctcaaacagcaaaaacgcattaccccgcac
atcatcagccagattatagaatttgccgccgacaggcgcggcgtgatggtttttgccgca
accgttgaacacgccaaagaagtcacggctctgttacccgtaaatgatgcggcactgatt
accgcagataccccaggccctgcccgcgatacattaatagaagcgtttaaaaaccagcag
ttccgttttctggtcaacgtttcagtgcttactaccggatttgacgcaccgcatgtcgac
ttaattgcgattctgcgcccgacggaatcggtcagtctttatcagcaaattgtcggtcgc
gggttgcgcctggcgcccggtaaaaaggattgtttgattctggactacgccgggaatcct
catgatttgttcacgccggaagtgggtgcggcgaaaggcaaaagcgacaatgtgccggta
caagttttttgcccttcctgtggttttgccaacaccttctggggaaaaaccaccagcgac
ggcaaattgattgagcactttggtcgccgctgccagggctggtttgaagatgatgacggt
acgcgcgaacagtgcgattaccgtttccgctttaaaaattgcccgcaatgcaacgcagaa
aatgatattgccgcgcggcgctgccaccaatgcgcgagtgttctggtcgacccggacgat
atgttaaaagccgcactgaaattaaaagacgcgctggttctgcgctgcggcggcatgacg
ctgcaacacggtggcgatgaaaaaggcgactggctgaagattacctattttgatgaagac
ggcaccgatgtcagcgaacggttccgcctgcaaacacccgcccagcgtatggcgtttgaa
cagctatttattcgccctcacagccgtgcgcctggcgtgccgctgcgctggataaacgcc
gccgatgtggtcgctcagcaatccgcgcttcgccacccggactttgtcgtggcacgcaag
aatggcaacttctggaacgtgcgggaaaaggtatttgattacgaaggacgcttccgtcgc
gcaaatgaattgcgtggctaa
DBGET
integrated database retrieval system