Burkholderia sp. CCGE1001: BC1001_0475
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Entry
BC1001_0475 CDS
T01424
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug00260
Glycine, serine and threonine metabolism
bug00460
Cyanoamino acid metabolism
bug00630
Glyoxylate and dicarboxylate metabolism
bug00670
One carbon pool by folate
bug00680
Methane metabolism
bug01100
Metabolic pathways
bug01110
Biosynthesis of secondary metabolites
bug01120
Microbial metabolism in diverse environments
bug01200
Carbon metabolism
bug01230
Biosynthesis of amino acids
bug01240
Biosynthesis of cofactors
bug04981
Folate transport and metabolism
Module
bug_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BC1001_0475
09102 Energy metabolism
00680 Methane metabolism
BC1001_0475
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BC1001_0475
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BC1001_0475
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BC1001_0475
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BC1001_0475
Enzymes [BR:
bug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BC1001_0475
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ADX53937
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All DBs
Position
1:525099..526346
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AA seq
415 aa
AA seq
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MFDRAQSTIANVDPELWKVIELENRRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVAEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLRPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFKVVSYGLNEAEDIDYDAAEKLAQEHKPKLIVAGASAFAL
RIDFERLSKIAKSVGAYFMVDMAHYAGLVAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKQINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKAYQQQVVENARALAETL
VKRGLRIVSGRTESHVMLVDLRAKKITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGTKEAEQVGNLIADVLDNPEDAATIERVRGQVAELTQRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgccaacgtcgaccctgaactctggaaggtgatc
gagctggaaaaccgccgtcaggaagagcacatcgaactgatcgcgtcggaaaattacacg
agcccggctgtgatggccgcgcaaggctcgcaactgaccaataaatacgcggaaggctat
cccggcaagcgctactacggcggctgcgaatatgtcgacgtggcggaacagctcgccatc
gaccgtgtcaagcagctcttcggcgccgaagcggcgaacgtgcagccgaactcgggctcg
caggcgaaccagggcgtctttttcgcgatgctgaggccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgcccgtcaacatgtcgggtaagtgg
ttcaaggtggtcagctacggcctgaacgaagccgaagacatcgactacgacgctgccgaa
aagctcgctcaggaacacaagccgaagctgatcgtcgcaggcgcgtcggcttttgcgctg
cgtatcgacttcgagcgtctctcgaagattgcgaagtccgtcggcgcatacttcatggtc
gacatggcgcactacgccggcctcgtcgccgcgggcgtctacccgaaccccgtgccgcac
gccgactttgttacgaccaccacgcacaagagcctgcgcggcccgcgcggtggcgtgatc
ctgatgaaggccgagttcgagaagcagatcaactcggcaatcttcccgggcattcagggc
ggtccgctcatgcacgtgatcgccgcaaaggctgtcgcgttcaaggaagcgctgtcgccg
gaattcaaggcttatcagcagcaagtcgtggaaaacgcccgcgcgctcgccgaaacgctc
gtcaagcgcggtctgcgtatcgtctccgggcgcaccgagagccacgtcatgctggtcgat
ctgcgcgcgaagaagattaccggcaaggctgcggaagccgcgctcggcgcagctcacatc
acggtcaacaagaacgcgattccgaacgacccggaaaagccgttcgtgacgagcggcatc
cgcctcggctcgccggccatgaccacgcgcggcttcggcacgaaggaagcggagcaggtg
ggcaacctgattgccgacgtgctggacaacccggaagacgccgccacgatcgaacgcgtg
cgcgggcaagtcgccgagctgacgcagcgcttcccggtttaccgctaa
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