Burkholderia sp. CCGE1001: BC1001_0965
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Entry
BC1001_0965 CDS
T01424
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03030
DNA replication
bug03430
Mismatch repair
bug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BC1001_0965
03430 Mismatch repair
BC1001_0965
03440 Homologous recombination
BC1001_0965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bug03032
]
BC1001_0965
03400 DNA repair and recombination proteins [BR:
bug03400
]
BC1001_0965
Enzymes [BR:
bug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BC1001_0965
DNA replication proteins [BR:
bug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BC1001_0965
DNA repair and recombination proteins [BR:
bug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BC1001_0965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
RecG_wedge
HROB
Motif
Other DBs
NCBI-ProteinID:
ADX54416
LinkDB
All DBs
Position
1:1072410..1076000
Genome browser
AA seq
1196 aa
AA seq
DB search
MSPMSDPRFVHLRLHSEFSIADGIVRLDDVVKAAAKDGQGALALTDLGNAFGLVRFYKEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEVE
AGWLESGLGEGLLALSGAQQGDIGLALAAGNQEAARRNALHWAKVFPGGFYIELQRCGQP
GGEQYVQQAVALAASLKLPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRQKRFTP
EQYFRTQDEMAALFADIPSALANSVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVHL
SKEGLEKRLEQLYPDEAERAAQRETYYQRLEFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKKDWSLGQVPLDDPA
SFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAQ
HRELFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCIVNKMAVLPPDINLSAYRFEPVAEADGKRSRTIRYGLG
AIKGSGQNAIEEILRAREDGPFIDIFDFCNRIDRRVVNRRTIEALIRAGAFDSLHQNRAQ
LIASVSLAMEAAEQASANALQAGLFDMGDAPSQGHELVDEPEWPEKKKLQEEKAALGFYL
SGHLFDAYKDEVRRFVRQKIGELKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGTGQC
EVTVFNEIFEANKQLFKEDELLVVQGQARNDAFTGGIRFTVETVMDLGRARCRYAEAVKV
KMNGNADAQALRRVLEAHSAGKDEPQAAPAPAAAARGNGGGRNGGQGGGFGGYGDNNGRQ
RQPVHIPNGLAVQVVYRSENAEGEVRLGDAWRVKPTDELLADLRGQFAGSAIEIVY
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgtcagatccccgcttcgtccatctccgcctccactccgaattttcgatc
gccgacggcatcgtgcgtcttgacgacgtcgtcaaggcggccgccaaagacggtcaaggg
gcgctcgccctgaccgacctcggcaacgcgttcggcctcgtccgtttctacaaggaagcg
cgcggcaaaggggtcaaacccattgccggctgcgacgtctggatcaccaatccggacgac
cgcgacaaaccttcgcgcctgttgctgctggtgaaggaccggcgcggctatctgaacctt
tgcgagttgttgagcaaggcatcgctcacgaaccagtaccggggccgtgcggaagtcgag
gccggctggctcgagtcgggactcggcgaaggcctgctcgcgttgtcgggcgcccagcag
ggcgacatcggccttgcgctggccgcgggcaaccaggaggcggcgaggcgcaacgcgctg
cattgggcgaaggtgtttccgggcggcttctatatcgagttgcagcgttgcggtcagccg
ggcggcgagcagtacgtgcagcaggcggtggcgctcgcggcgtcgttgaaactgccggtg
gtcgccacgcaccccatgcagttcatgacgcccgacgacttcaccgcgcacgaagcgcgc
gtgtgcatttccgaaggcgacattcttgcgaatccgcggcgccagaagcgctttacacct
gagcaatatttccgcacgcaggacgagatggccgcgctttttgcggatattccgtcggcg
ctcgccaactcggttgaaatcgcgaaacgctgcaatctcacgctcgaactgggtaagccg
aagctgccgctctttccgacgcccgacggcatgtcgctcgacgactacctcgtgcatctg
tcgaaagagggcctggaaaaacgcctcgaacagttgtatccggacgaagcggagcgcgcc
gcgcagcgcgagacgtattaccagcgcctcgaattcgagtgcggcacgatcatcaagatg
ggctttccgggctacttcctgatcgtcgcggactttatcaactgggcgaagaacaacggc
gtgccggtggggccgggccggggctcgggcgcgggctcgctcgtcgcctatgcgcttggc
gtgaccgacctcgatccgctgcgttacaacctgctgttcgagcgtttcctgaatcccgaa
cgcgtgtcgatgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatc
cagtacgtgaaggaaaagtacggcgccgacgccgtctcgcaaattgcgaccttcggcacg
atggcggcgaaggcggcggtgcgcgacatcggccgcgtgctcgatctcggctacatgttc
acggacggcattgcgaagctgattccgttcaagcccggcaagcatgtcacgattgccgac
gcgatgaaggaagagccgctcttgcaggagcgcttcgacaacgaagacgaagtgcaccag
ctgctcgaactcgcgcagcgcgtggaaggtctgacccgtaacgtcggcatgcacgcgggc
ggcgtgctgatcgcgcccggcaagctcaccgatttttgcccgctctacacgcaaggcgac
gagagcggcgtggtgagccagtacgacaaggacgacgtcgaagccgtcggtctcgtcaag
ttcgactttctgggtctgaccacgctcaccattctcgactgggccgagcgttatatccgc
cgtctggacccgtcgaagaaagactggtcgctcgggcaggtgccgctcgacgatccggca
tcgttctcgatcctcaagaaagcgaacaccgtcgccgtgttccagctggaaagccgcggc
atgcagggcatgctgaaggacgcgcagcccgaccgcttcgaagacatcatcgcgctcgtc
gcgttgtatcgtccgggcccgatggacctgatcccgagcttctgcgcgcgtaaacacggc
cgcgaagtggtcgagtatccggacccgcgcgtcgaacctgttctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggctattcgctg
ggcggcgccgacttgctgcgccgggccatgggtaagaaaaagcccgaagaaatggcccag
caccgcgagctttttgcggaaggcgccgccaagaacggtctgacgcgcgagaagtccgac
gaaatcttcgacttgatggagaagttcgcgggctatggcttcaacaagtcgcacgcggcc
gcttacgcgctgctcgcgtactacaccgcgtggctgaaggcgcaccatccggcggaattc
atggcggcgaatatgtcgctcgccatggacgacacggacaaggtgaagatcctgttcgaa
gactgcatcgtcaacaagatggccgtgctgccgccggacatcaacctgtcggcatatcgc
ttcgagccggtcgcggaggcggacggcaagcgctcgaggaccattcgctacggcctcggc
gcgatcaagggcagcggtcagaacgcgattgaagaaatcctgcgggcgcgcgaggatggc
ccgtttatcgacatttttgatttttgcaaccggattgaccgccgcgtcgtcaatcgccgc
acgattgaagcgttgatccgcgccggcgcgttcgacagcttgcatcagaaccgcgcgcag
ctcatcgcctcggtgtcgctcgccatggaagccgccgagcaggcgagcgccaatgcattg
caggcgggcctcttcgatatgggcgacgcgccttcgcaagggcacgaactggtggacgaa
ccggagtggcccgaaaagaagaagctccaggaagaaaaggccgcgctcggcttctacctg
tcgggccacctgttcgacgcctacaaggacgaggtgcgccgcttcgtgcgccagaagatc
ggcgagctgaaagaagggcgcgacaaactggtggcgggcatcatcgcatcgctgcgcacg
cagatgactcaacgcggcaagatgctcatcgcgctgctcgacgacggcaccggtcaatgc
gaagtgacggtgttcaacgaaatcttcgaggcgaacaagcagttgtttaaggaagacgag
ctgcttgtcgtgcaaggccaggcgcgtaacgacgcgttcacgggcggcatccgcttcacg
gtggaaacagtcatggatctgggccgggcgcgctgccgttatgcagaggccgtgaaggtg
aagatgaacggcaacgcggacgcgcaggcgttacggcgtgtcctcgaagcgcacagcgcg
ggcaaggacgagcctcaggcagcgccggcgcctgccgctgccgcacgcggcaacggcggc
ggtcgcaatggtggtcagggcggcggctttggcggctacggcgacaacaacggccgtcag
cgtcagccggtgcatattccgaatggactcgcggttcaggtcgtgtaccgcagcgagaat
gccgagggcgaagtgcgtcttggcgacgcgtggcgcgtcaagccgaccgacgagctgctc
gccgacctgcgcggccaattcgccggcagcgcgattgagatcgtctattga
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