Burkholderia sp. CCGE1001: BC1001_1560
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Entry
BC1001_1560 CDS
T01424
Name
(GenBank) hopanoid biosynthesis associated radical SAM protein HpnJ
Organism
bug
Burkholderia sp. CCGE1001
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ADX54996
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All DBs
Position
1:1782407..1783828
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AA seq
473 aa
AA seq
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MKTLFLQAPSYDGFDGGAGSRYQAKREVRSFWYPTWLAQPAALVAESRVLDAPADGLSVE
ATLDIAQQYELVVIHTSTPSFPTDALFAEDLKKRKPSVLIGMVGAKVAVDPHNSLTASEA
IDFVCREEFDYTCEEVAAGKPFAQILGLSYRAADGSIEHNAARPILENMDELPFVAPVYK
RDLKIDNYFIGYLKHPYVSIYTGRGCRSKCTFCLWPQTVGGHRYRTRSVENVLEEVKWIR
DNMPEVKEIMFDDDTFTDFKPRVEEIARGLGKLGVTWSCNAKANVPYSTLKIMKENGLRL
LLVGYESGDDQILLNIKKGLRTDIARRFSEDCRKLGIKIHGTFILGLPGETQETIQKTIE
YAKEINPHTIQVSLAAPYPGTRLYDQAVENGWLEENKVINLVSKEGVQLAAIGYPHLSRE
EIYHQLENFYKRFYFRPSKIWEILREMLTSWDMMKRRLREGVEFFRFLRAHEA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactctgttcttgcaggcgccgtcgtatgacggcttcgatggtggcgccggttcg
cgctaccaggccaagcgcgaagtccgctcgttctggtatccgacgtggcttgcacaaccg
gccgcactcgttgccgagagccgtgtgctcgatgcgcccgccgacggcctgtcggtcgag
gcaacgctcgacatcgcgcagcaatacgagctcgtcgtcattcatacgagcacgccgtcc
tttcccaccgacgcgctgttcgccgaagacctgaaaaagcgcaagccatcggtcctgatc
ggcatggtgggcgcgaaggtcgccgtcgatccgcacaattcgctgacggcgagcgaggcg
atcgacttcgtgtgccgcgaggaattcgactacacctgcgaggaagtggccgcgggcaaa
ccgttcgcgcagattctcgggctcagctatcgcgctgccgacggctcgatcgagcacaac
gcggcccgcccgatcctcgagaacatggacgagctgccgttcgtcgcgcccgtctacaag
cgcgatctgaagatcgacaactatttcatcggctacctgaagcacccgtatgtgtcgatc
tacacgggacgcggctgccgctcgaaatgcaccttctgcctatggccgcagaccgtgggc
gggcaccgctaccgcacgcgctcggtggaaaacgtgctcgaagaagtgaagtggattcgc
gacaacatgcccgaagtgaaggagatcatgttcgacgacgacaccttcaccgacttcaag
ccgcgcgtcgaagaaattgcccgtggtctcggcaagctcggggtgacgtggtcgtgcaac
gcgaaagccaacgtgccgtattcgacgctcaagatcatgaaggaaaacggtctgcgcctc
ttgctcgtcggctacgaatccggcgacgaccagatcctgctgaacatcaagaagggcctg
cgcacggacatcgcgcggcgtttcagcgaagactgccgcaagcttggcatcaagattcac
ggcacgttcattctcggtctgccgggcgaaacccaggagaccatccagaagacgatcgag
tacgcgaaagagatcaatccgcacaccattcaggtgtcgctcgccgcgccgtatccgggc
acgcgcctttacgatcaggcggtcgaaaacggctggctcgaagaaaacaaggtcatcaac
ctcgtcagcaaggaaggcgttcagctggcggccatcggctatccgcatctgtcgcgcgaa
gagatttatcaccagctggaaaacttctacaaacgcttctacttccggccgtcgaagatc
tgggaaatcctgcgcgaaatgctgacgagctgggacatgatgaaacggcgcttgcgtgaa
ggcgtcgaatttttccgctttctgcgcgcgcacgaggcgtga
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