Burkholderia sp. CCGE1001: BC1001_1736
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Entry
BC1001_1736 CDS
T01424
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BC1001_1736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bug03400
]
BC1001_1736
DNA repair and recombination proteins [BR:
bug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BC1001_1736
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1045
DUF3284
ROH1-like
TFIIF_alpha
Motif
Other DBs
NCBI-ProteinID:
ADX55171
LinkDB
All DBs
Position
1:complement(2002930..2003970)
Genome browser
AA seq
346 aa
AA seq
DB search
MAHMIWKGAISFGLVHVPVQLYPATKSEKVGFNLLDKRTIDPVGYKQINKRTGKDVTRDN
IVRGFEYEKDKYVVLTDEEIRAANPESTQTVDILAFVDAPDISFLYLDTPYFLTPDRKGE
KVYALLREAMKSSGKVGVASVVLHNKQHLAALIPVGPVLALNTLRWADEVRDFDEFKLPA
EGAKAAGVSARELDMAQKLIDDMSDTWDPSKYHDTFRDDIMALVERKVREGKTEEIADIE
APRESRQSADILDLSELLKRSLGRGKSKPAAGSRKRATDDEAADDNADAEEDSSGSTASR
KKARTTRSNRTSRSGGSGGSGGTSSSGSGRTASKSTTAARKRRAAA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcacacatgatctggaaaggcgcgatcagcttcggccttgtccacgtaccggtgcag
ttgtatccggccacgaagtcggaaaaggtcggcttcaatctgctggataagcgcacgatt
gatccggttggctataagcagatcaacaagcgcacgggcaaggacgtgacgcgcgataac
atcgtgcgcggcttcgaatacgagaaggacaagtacgtcgtcctcacggacgaggaaatc
cgcgcggccaatcccgaatcgacgcagacggtggacatcctcgcctttgtcgacgccccc
gacatctcctttctctacctcgacacgccttacttcctgacgcccgaccgcaagggcgag
aaggtgtatgcgctgttgcgcgaggcgatgaaatcgtcaggcaaggtcggcgtggccagt
gttgtgctgcataacaagcagcacctcgccgcgttgattcccgtcggtccggtgctggcg
ctcaacacgctgcgctgggcggacgaggtgcgggacttcgacgaattcaagctgcccgcc
gaaggcgccaaagccgcgggcgtcagcgcgcgcgagctggacatggcgcaaaagctgatc
gacgacatgagcgacacgtgggatccgtcgaagtatcacgacacattccgcgacgacatc
atggcacttgtcgagcgcaaggtccgcgaaggcaagacggaggaaatcgccgacatcgag
gcgccgcgcgaatcgcgtcaatcggccgatattctcgacttgtcggagctgctcaagcgc
agcctggggcgcggcaagagcaagcccgcggcgggctcgcgcaagcgcgcgacagacgac
gaagccgccgatgacaatgcggacgccgaagaagacagcagcggctccacggcgtcgcgt
aaaaaagcgcgcactacgcgctcgaaccgcacgtcgcgctcgggcggcagcggcggcagc
ggcggcaccagtagcagcggcagcggccgcacggcgtcgaaatcgaccacggcagcacgc
aagcgccgcgcggcggcatga
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