Burkholderia sp. CCGE1001: BC1001_2190
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Entry
BC1001_2190 CDS
T01424
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BC1001_2190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bug03400
]
BC1001_2190
Enzymes [BR:
bug01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BC1001_2190
DNA repair and recombination proteins [BR:
bug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BC1001_2190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADX55607
LinkDB
All DBs
Position
1:complement(2484664..2485698)
Genome browser
AA seq
344 aa
AA seq
DB search
MALNESVLEEFGLAPRWVRRGMAAAQEAAGTLSVEQGGAPGTSAAGLPPERLQNGEPAGR
ALPQPAVDDSDARTALSSFTPEPQRASSPAVASRAPHVAEPPATSEPSSFGAPPDDGFAW
FDDLPLHPPGEAHAAVPALPAIHTLDWDALSERVANCERCRLCEKRTQAVFGVGDRNADW
MLIGEAPGENEDRVGEPFVGQAGKLLDNMLRSLTLARGANVYIANVIKCRPPGNRNPEPD
EVARCEPYLQRQVELVKPKLIVALGRFAAQSLLKTDASISSLRGRVHQYEGVPVIVTYHP
AYLLRSLPDKAKAWADLCLARDTWREAADEAGREGGAASGAAPR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaatgaatcggtactggaagagttcggactcgcgccgcgctgggtgcgtcgc
gggatggccgcggcgcaggaagcggccggcacgctgagtgtggagcagggcggcgcgccc
gggacttccgcggcgggcttgccgccggagcgcttgcagaacggagagccggccggacgc
gctcttccgcaacccgcagtcgacgacagcgatgcgcgaactgctctgtcgtcgttcacg
cctgagccgcagcgcgcgtcgtcgccggctgtcgcaagccgcgctccgcacgtggccgag
ccgccggccacgtccgagccgtcgtccttcggcgccccgcccgacgacggcttcgcatgg
ttcgacgatctgccgctgcatccgccgggcgaagcccacgccgctgtgcccgcgctgccg
gccatccatacgctcgactgggacgcgctctcggagcgcgtcgcgaactgcgagcgttgc
cggctgtgcgaaaagcgcacccaagccgtattcggcgtcggcgatcgcaacgccgactgg
atgctgatcggcgaagcgcccggcgaaaacgaggaccgcgtgggcgagcctttcgtcggc
caggccggcaagctgctcgacaacatgctgcgttcgctcacgctcgcgcgcggcgcgaat
gtgtatatcgccaacgtcatcaagtgccggccgccgggcaaccgcaatcccgaaccggac
gaagtcgcgcgctgcgaaccctatctgcaacgccaggtggagctcgtcaagccgaagctg
atcgtcgcgctcggccgcttcgccgcgcaaagtctgctcaagaccgacgcgagtatttcg
tcgctgcgcgggcgcgtccaccaatacgagggcgtgccggtgatcgtcacctatcacccg
gcttatctgttgcgcagcctgcccgacaaggccaaggcgtgggccgatctgtgccttgcg
cgcgacacctggcgcgaggcggcggatgaagcggggcgcgaaggcggcgcggcgtccggc
gcggcgccgcggtga
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