Burkholderia sp. CCGE1001: BC1001_2597
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Entry
BC1001_2597 CDS
T01424
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BC1001_2597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bug03019
]
BC1001_2597
03009 Ribosome biogenesis [BR:
bug03009
]
BC1001_2597
Messenger RNA biogenesis [BR:
bug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BC1001_2597
Ribosome biogenesis [BR:
bug03009
]
Eukaryotic type
Pre-60S particles
RNases
BC1001_2597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
pP_pnuc_1
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
ADX56013
LinkDB
All DBs
Position
1:complement(2964873..2965484)
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AA seq
203 aa
AA seq
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MTDILESAQQPPLVRSDMNLVWLDMEMTGLDPDSDRIIEIAVVVTNSTLDRMVEGPVFAI
HQSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEADATVLIRDFLGAYVPPGKSPMCGNS
ICQDRRFMARWMPELETFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPPAPDASMNAE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcctcgaatccgcccaacagccgccgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgaccccgactcggaccgcatcatcgaaatc
gcggtggtggtgacgaattcgacgctcgacagaatggtcgaaggtccggttttcgctatc
catcagagcgacgagacgctcgcgaaaatggaccagtggaatcagaacacgcacgggcgc
tctgggctgatcgaccgcgtgaaggcctcgacggtgagcgaagccgacgccacggtgctg
atccgcgattttctgggcgcttacgtgccgccgggcaaatcgccgatgtgcggcaactcc
atctgccaggaccgccgcttcatggcgcgctggatgccggaactggagaccttcttccac
taccgcaatctcgacgtcagcacgctcaaggaactgtgccggcgctggcagccggccatt
tacaagggcttccagaagcgcgcgatgcacacggcgctcgccgacattcacgaatcgatc
gacgagctcaagtattatcgcgagcatttcctgattccgcccgcgccggacgcgtcgatg
aacgcggaataa
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