Burkholderia sp. CCGE1001: BC1001_2703
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Entry
BC1001_2703 CDS
T01424
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03030
DNA replication
bug03430
Mismatch repair
bug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BC1001_2703
03430 Mismatch repair
BC1001_2703
03440 Homologous recombination
BC1001_2703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bug03032
]
BC1001_2703
03400 DNA repair and recombination proteins [BR:
bug03400
]
BC1001_2703
Enzymes [BR:
bug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BC1001_2703
DNA replication proteins [BR:
bug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BC1001_2703
DNA repair and recombination proteins [BR:
bug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BC1001_2703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADX56119
LinkDB
All DBs
Position
1:complement(3082299..3083459)
Genome browser
AA seq
386 aa
AA seq
DB search
MSEPFLAEPALAEPIVFVDLETTGGSTNEHRITEVGVVEVGPTGVTRWSSLVDPQQPIPS
FIQQLTGITNAMVRGAPTFEAIAPELFARLDGKLFVAHNASFDRGFLRGEFRRVGISFDP
DVLCTVRLSRALFPSEKRHGLDALVERHALVPSDRHRALADADLIWQFWQRLHGLVPLDV
LRAQIERTTRRHRLAGDITEELLETAPAGCGVYAFYGDDDLPLYVGRSVRVRQRLRAHLT
GERRSSKDIRLAQQVRRVEWRATGGELGAMLAEAQWIAALRPGHNRVPRATKSDPVGAPW
PFQGPVVFEEREETSQACAFHVVDEWRYLGHAPSLAQAVELHAARATSGFELSTYRILQS
HLARGLRMTPLNVAGAEPAEPVVSLD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgtttttggccgaaccggccctcgctgagcctatcgtcttcgtcgatctt
gaaaccaccggcggctcgactaacgagcatcgcattaccgaggtgggtgtcgtggaagtg
gggccgacgggtgtcacgcgctggagcagcctcgtcgatccgcagcagccgatcccgtcg
ttcatccagcagctcaccggaatcaccaacgctatggtgcgcggggccccgacgttcgag
gccatcgcgcccgagttgttcgcgcgcctcgacggcaaactgttcgttgcgcataacgcc
agcttcgaccgtggtttcctgcgcggcgagttccggcgcgtcggcatttcattcgacccg
gacgtgctgtgcaccgtgcgcctgtcgcgggcgctattcccgtcggaaaagcgtcacggg
ctcgatgcgctcgtcgagcgccatgcgcttgtgccgtcggaccgccatcgcgcgctcgcc
gacgcggatctgatctggcagttctggcagcgcctccatggtctcgtgccgctcgacgtg
ttgcgcgcgcagatcgagcggacgacgcggcgccatcgcctggcaggcgacatcactgaa
gagctgctggaaacagcgccggccggctgcggcgtctacgccttctatggagacgacgac
ttgccgctatatgtcgggcgaagcgtgcgcgtccgtcagcgccttcgcgcacatctgaca
ggcgagcggcgctcgtcgaaggatattcggctcgcgcaacaagtgaggcgagtcgagtgg
cgcgccaccggcggcgaattgggcgcgatgctcgccgaggcgcagtggattgccgcgctg
cggccggggcacaatcgcgtgccgcgcgccacgaagagcgatcccgtcggcgcgccctgg
cccttccagggccccgtcgtttttgaagagcgcgaggagacctcgcaagcgtgtgctttc
catgtcgtcgacgagtggcgctacctgggccacgcgccgtcgttggcgcaggccgtcgaa
ctgcatgccgcgcgcgcgacgagtggtttcgagctctcgacgtaccggatcttgcaaagc
cacttggcgcgcggcttgaggatgacgccgctgaatgttgcgggcgccgagcccgccgag
ccggtcgtgagtctcgactga
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