Burkholderia sp. CCGE1001: BC1001_3014
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Entry
BC1001_3014 CDS
T01424
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bug03000
]
BC1001_3014
Transcription factors [BR:
bug03000
]
Prokaryotic type
Helix-turn-helix
Other families
BC1001_3014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_3
HTH_IclR
TetR_N
LacI
HTH_31
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ADX56428
LinkDB
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Position
1:3425939..3426784
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AA seq
281 aa
AA seq
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MMLSQVEEMREQLRPSERKLADYVIEAPREVLDLSMTEVAARAGVSQPTIARFCHALGFS
GFREFKIRLAQGIATEVPAVYRDVRPDEPAPGVAAKVFDRTIGALIQVRNTLSSDSVAAA
IDVLAQAKRIEFYGAGGSGIAALDMQHKFFRLGMPSVAYSDPHTFLMSAAMLGEGDVVVA
ISNTGRTRDIVDAAKSAVAGGAKVIAITHGNSPLARVASVGLFANVDEDTDIFSPMTSRT
SHLAIGDILAVGVALQRGPDLAEKLAGAKDLIARRRIGPEG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtcccaagtcgaagagatgcgcgaacaattgcgcccgtcggagcgcaagctc
gccgactatgtgatcgaggcgccgcgcgaggtgctcgacctctcgatgaccgaagtcgcg
gcgcgcgcgggcgtgagccagccgaccatcgcgcggttttgtcatgcgctcggcttttcg
gggtttcgcgagttcaagatccggcttgcgcagggcatcgccaccgaagtgccggccgtc
tatcgcgacgtgcgccccgacgaacccgcgcccggcgtggccgcgaaggtgttcgaccgg
accatcggcgcgctgatccaggtgcgcaacacgctctcctcggacagcgtggcggccgcc
atcgacgtgctcgcgcaggcgaagcggatcgagttttacggcgcgggcggctcgggcatc
gccgcgctggacatgcagcacaagtttttccggctcggcatgccgagcgtcgcctattcc
gatccgcacacgtttctgatgtcggcggcgatgttgggcgaaggcgacgtcgtcgtcgcg
atttcgaatacggggcgcacgcgcgatattgtcgatgcggcgaaatccgcggtggcgggc
ggcgccaaggtgatcgcgatcacgcacggcaattcgccgctcgcacgggtcgcctcggtt
ggactgtttgcgaatgtcgacgaagacacggacattttttcgccgatgacctcgcgcacg
tcgcacctcgcgatcggcgacattctggctgtcggcgtcgcgctgcaacgcgggccggat
ctcgctgaaaagctggccggcgcaaaggacctgatcgcgcggcgccggatcgggccggaa
gggtaa
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