Burkholderia sp. CCGE1001: BC1001_3059
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Entry
BC1001_3059 CDS
T01424
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bug03016
]
BC1001_3059
Enzymes [BR:
bug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BC1001_3059
Transfer RNA biogenesis [BR:
bug03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BC1001_3059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ADX56473
LinkDB
All DBs
Position
1:complement(3483567..3485705)
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AA seq
712 aa
AA seq
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MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPGAAELMQEADAV
AQDIDLDFLWECAPDEEFPFATLGAEYFGERFGPTERAALVLRMHGAPVYFRRKGRGMYQ
RAPQEQLKMALAGLERKRQQALVQQGYEEELKAGRLPEAFSGKTALALLTKPDKNTIEYK
ALEAAAAARGISQARLMLECGAIPSARALHEAKFLAEFFPHGTGFPPVTLGGLPDDLPEA
EVEAFSIDDITTTEIDDAFSVEHLADGRVRIGVHIAAPALGIQRGDEIDAIARARLSTVY
MPGDKITMLPDSVVDAFTLAEGGLRPALSLYVIVNRETQEIVASETRAERVFVKNNLRHN
TLDELVTEEALAAGTGDYPHKDDIAVLWPFAQALFEKRQAARAGYGLRREVQRNTDFNFY
VDGEHITITPRRRGSPLDTIVAELAILANSSWGAFLHDHGVPGIYRTQRAFGAPSGPKRT
RMQTNAAPHEGLGVTQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLF
AVVQGFDDTYSAYADHQRRMEYFWCLRWLKQENRKQVVASVVKGDLVRLEEIPLLLHVPG
LGVHARGTRLQMEVMSIDELTVEASVRLLHVLDAPTVTSGSEADEADEGEEDEIVDASDE
SAESEAEAQAEAAVESDSDENGEAKDDSDDDSAPGGEGTNAAAGQHITEPGR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggccggcagcgtgctgtcgcgccag
ggcgatgcgtttcaggtcgagttgccgggcggccggcgcgcgaaggtgcgcgcgaaagac
gtgctgatcgagttcgaaaaaccgggcgcggccgaactgatgcaggaggcggacgccgtc
gcgcaggacatcgatctcgacttcctgtgggaatgcgcgcccgacgaggagtttccgttc
gccaccctgggcgcggaatatttcggcgagcgcttcggcccgaccgagcgcgcggcgctg
gtgctgcgcatgcatggcgcgccggtctatttccgtcgtaagggccgcggcatgtatcag
cgcgctccgcaggagcagctgaaaatggcgctcgccggtctggagcgcaagcgccaacag
gcgctcgtgcagcaaggctacgaggaagagctgaaggccggccgcctgcccgaggccttc
agcggcaagacggcgctcgccttgctcacgaagcccgacaagaacaccatcgaatacaag
gcgctggaagccgcggcggccgcgcgcggcatttcgcaggcgcgtctgatgctggaatgc
ggcgcgattccgtcggcgcgcgcgctgcacgaggcgaaattcctcgcggagtttttcccg
cacggcaccggctttccgccggttacgctcggcggcttgccggacgatctgccggaggcg
gaggtcgaggcgttttcgatcgacgacattacgaccactgaaatcgacgacgcgttttcc
gtcgaacatctcgcggacggccgcgtgcggatcggcgtgcacatcgccgcgccggcgctc
ggcattcagcgcggcgacgagatcgacgcgattgcacgcgcgcgtctgtcgacggtctac
atgccgggcgacaagatcacgatgctgcccgacagcgtcgtcgacgcgttcacgctcgcc
gagggcggcttgcgccccgcgctgtcgctgtatgtgatcgtcaaccgcgagacgcaggaa
atcgttgcgagcgaaacacgcgccgaacgcgtgttcgtgaagaacaatctgcggcacaac
acgctcgacgaactcgtcaccgaagaagcgctcgccgccggcacgggcgactatccgcac
aaggacgacattgccgtgctgtggccgttcgcgcaggcactgttcgaaaagcgccaggcc
gcgcgcgcgggctacggcttgcgccgggaagtgcagcgcaataccgacttcaacttctat
gtggacggcgagcacatcacgatcaccccgcgccggcgcgggtcgccgctcgacacgatc
gtcgcggaactggcgattctcgcgaactcctcgtggggcgcgtttttgcacgatcatggc
gtgccgggcatttatcgcacgcagcgcgcgttcggcgcgccgagcggccccaagcgcacg
cgcatgcagaccaatgccgcgccgcacgaagggctcggcgtcacgcaatacgcgtggagc
acgtcgccgctgcgccgttatgtcgatctggtgaatcagtggcagctgctcgcgtgcgtg
cagcacggcgtgaccgcgaagctggccgcgccgttcaagccgaaagacgccgacctgttc
gccgtcgtgcaaggtttcgacgatacctacagtgcctacgccgatcaccagcgccgcatg
gaatatttctggtgcctgcgctggctcaagcaggagaacaggaagcaggtggtggcgtcg
gtcgtgaagggcgatctcgtgcggctcgaagagattccgctgctgctgcatgtgccgggc
ctcggcgtgcatgcgcgcggcacgcgcctgcaaatggaagtgatgtcgattgacgagttg
acggtcgaggcatccgtgcgtcttctgcatgtgctggatgcgccgactgtcacgagcggc
agcgaagcggacgaggccgacgaaggtgaagaggacgaaatcgtcgatgcatcggatgaa
agtgccgagagcgaagctgaggcacaggccgaagccgctgtcgagtccgacagcgacgag
aatggcgaagcgaaagacgacagcgacgacgacagcgcgcccggcggcgagggcacgaat
gccgccgctgggcaacacatcacggaacccggacgatga
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