Burkholderia sp. CCGE1001: BC1001_3244
Help
Entry
BC1001_3244 CDS
T01424
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug00300
Lysine biosynthesis
bug00470
D-Amino acid metabolism
bug01100
Metabolic pathways
bug01110
Biosynthesis of secondary metabolites
bug01120
Microbial metabolism in diverse environments
bug01230
Biosynthesis of amino acids
Module
bug_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BC1001_3244
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BC1001_3244
Enzymes [BR:
bug01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BC1001_3244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
S-methyl_trans
SH3BP5
Exo70_N
Motif
Other DBs
NCBI-ProteinID:
ADX56658
LinkDB
All DBs
Position
1:3682994..3684256
Genome browser
AA seq
420 aa
AA seq
DB search
MTRPAFDYVDGVLHAEGVSAVSLAEQFGTPLYVYSRAALTDAWNAYAGACAGRRASVHVA
VKANSNLAVLNVFARLGAGFDIVSGGELARVLAAGGKAENTVFSGVGKHADEMREALAAG
VKCFNVESIPELDRLNAVAAQMDRKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDA
RATYQAAAAMANLEVVGIDCHIGSQITEVAPYLDAVDKLLELVEQIEQDGLTIRHIDVGG
GLGITYDDETPPDIGDFVSTVLDRIEARGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPG
AEKNFAIVDAAMNDLARPAMYEAYHVIDAAVQREVPAHVYDVVGPVCESGDWLGRERLLS
VEPGDLLAIRSAGAYGFVMSSNYNTRPRAAEVMVDGTQAHVVRAREEVQQLFAGESILPA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactcgacctgcatttgactatgtcgacggcgtgctgcacgccgaaggcgtgtccgcc
gtttcgctcgccgaacagttcggcacgccgctctatgtgtactcgcgcgccgcgctcacc
gacgcgtggaacgcctacgcgggcgcatgcgccggccgccgcgcgagcgtgcacgtcgcc
gtcaaggccaacagcaatctcgcggtgctgaacgtgttcgcgcgactcggcgcgggcttc
gacatcgtgtcgggcggcgaactggcgcgcgtgctggcagcgggcggcaaggcggaaaac
accgtgttttcgggcgtcggcaagcacgcggacgaaatgcgcgaagcgcttgcggccggc
gtcaaatgcttcaacgtcgagtcgattccggaactggatcgcctgaacgcagtggcggcg
caaatggacaggaaggcgccggtttcgctgcgcgtgaaccccgacgtcgacgcgaaaacg
catccctatatttccaccgggctcaagtcgaacaagtttggtgtcgcattcgaagatgcg
cgcgccacctatcaggcggccgcagccatggcgaacctcgaagtggtcggcatcgactgc
catatcggttcgcagatcacggaggtggcgccttacctcgacgccgtcgacaagctcctg
gagctcgtcgagcagatcgagcaggacggcctcacgatccgtcatatcgacgtgggcggc
ggcctcggcattacctacgacgacgaaacgccgccggacatcggcgacttcgtgagcacg
gtgctcgaccgcatcgaggcgcgcggccacggccaccgcgaggtgtacttcgagccgggc
cgttcgctcgtcggcaatgcgggcgtgctgctcacgcgcgtcgaatttttgaagccgggc
gctgaaaagaacttcgccatcgtcgatgcagccatgaacgatctcgcccgcccggcgatg
tacgaggcgtatcacgtcatcgacgccgccgttcagcgcgaagtgccggcgcatgtgtac
gacgtcgtcgggccggtctgcgaaagcggcgactggctcgggcgcgagcgcctgctctcc
gtcgagccgggcgacctgctcgccatccgctcggccggcgcgtacggctttgtgatgagc
tcgaactacaacacgcgcccgcgcgcagcggaggtcatggttgatggtacacaagcgcat
gtggtccgtgcgcgcgaggaagtccagcagctgtttgcgggcgaaagcatcctgccggcg
taa
DBGET
integrated database retrieval system