Burkholderia sp. CCGE1001: BC1001_3287
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Entry
BC1001_3287 CDS
T01424
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC1001_3287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bug03019
]
BC1001_3287
03400 DNA repair and recombination proteins [BR:
bug03400
]
BC1001_3287
Enzymes [BR:
bug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BC1001_3287
Messenger RNA biogenesis [BR:
bug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BC1001_3287
DNA repair and recombination proteins [BR:
bug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BC1001_3287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADX56701
LinkDB
All DBs
Position
1:complement(3714684..3716531)
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AA seq
615 aa
AA seq
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MSRPLEILNEVFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPSLVRRERGF
GTGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSSAEAMATERALRDGDIDLLYVAPER
LMTPRFQELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATAD
AITRDEIIHRLALDDARIFVSSFDRPNIRYRIVEKDNARTQLLDFIRAEHTRADGTTDAG
VVYCLSRRKVEETAEWLKEKGMRALPYHAGMEFETRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPSNAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTGKLDALLGLCEAATCRRVRLLAYFGEASKPCGNCDNCLEPPATWDATREAQMA
LSCVFRAQRASGFNFGAGHLIDILRGNRSEKILQRGHEKLTTFGIGAALGEPEWRAVFRQ
LVAFGYLTVDHEGFGSLVLTEASKPVLKGEQSVTMRRYVKPTRTRQSSGRTSERADPTLG
MGPRERARWERLRAWRTETAKSDGVPAYVIFHDATLAEIARNGPDSIEDLRGIPGMGARK
LDRFGEELLEVVAAD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccgctcgaaatcctcaacgaagtctttggctaccccgcgttcagaggacaa
caaggcgaaattgtcgagcacgtcgccggcggcggcgactgtctggtgctgatgccgacg
ggcggcggcaaatcgctgtgttatcagataccgtcgctcgtgcgccgcgagcgcggcttt
ggcacgggcatcgtcgtttccccgctgatcgcgctcatgcaggatcaggtggcggcgctg
accgaagtcggcgtgcgcgcggcgtacctgaactccacgctgtcgagcgccgaggccatg
gcgaccgagcgtgcgttgcgcgacggcgacatcgatctcctgtatgtcgcgccggaacgt
ttgatgacgccgcgcttccaggaattgctggagcgcacgcgcatcggcctgttcgccatc
gacgaggcgcattgcgtgtcgcaatgggggcacgacttccggcccgaatatatccagttg
tcggtgctgcacgagcgtttcccgaatgtgccgcgcattgcactgacggccaccgcggac
gcgatcacgcgcgacgagatcatccaccgtctcgcgctggacgacgcgcgcatcttcgtc
tccagtttcgaccggccgaatattcgctaccggattgtcgaaaaggacaacgcgcgcacg
cagctgctcgacttcattcgcgcggagcacacgcgcgcggacggcacgaccgacgccggc
gtcgtctattgcctgtcgcggcgcaaggtcgaggaaaccgccgagtggctgaaggaaaaa
gggatgcgcgcgctgccgtatcacgcgggtatggaattcgagacgcgccagaaacatcag
gaaatgtttcagcgcgaggaaggcatcgtcatgtgcgcgacgattgcgttcggcatgggc
atcgacaagccggacgtgcgctttgtcgctcacctcgatttgccgaagagcgtcgaaggc
tattaccaggaaacgggccgggcggggcgcgacggcatgccgtccaacgcgtggatggcc
tacgggctcggcgacgtcgtccagcagcgcaagatgatcgacgagtccgacgccgacgac
gcgcacaagcgcgtccagacgggcaagctcgacgcgttgctcgggctctgcgaagcggcg
acgtgccggcgcgtgcggcttctcgcgtacttcggcgaagcgagcaagccgtgcggcaac
tgcgacaactgcctcgagccgcccgccacgtgggacgcgacgcgtgaggcgcagatggcg
ctttcctgtgtgttccgcgcgcagcgggcgagcggtttcaatttcggcgcgggccatctg
atcgacattttgcgcggcaatcgcagcgagaaaatcctgcagcgcggtcatgaaaagctg
accaccttcggcatcggggccgcgctcggcgagccggagtggcgcgcggtgtttcggcag
ctcgtggcattcggctacctgacggtcgatcacgaaggcttcggctcgctcgttctcacc
gaggcgagcaagcccgtgttgaaaggcgagcaaagcgtgaccatgcgccgctacgtgaag
cccacccggacccgccagtcgtccgggcggaccagtgaacgcgcggatccgacgctcggc
atgggtccccgcgaacgggcacgctgggagcggctgcgcgcgtggcgcacggaaaccgcg
aaaagcgacggcgtgccggcgtatgtcattttccacgacgccacactggccgagatcgcg
cgcaacggccccgattcgatcgaggatctgcgcggcattccgggcatgggcgcgcgcaag
ctcgaccgtttcggcgaggaactgctggaagtcgtcgccgcggattga
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