Burkholderia sp. CCGE1001: BC1001_3728
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Entry
BC1001_3728 CDS
T01424
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BC1001_3728
09124 Replication and repair
03420 Nucleotide excision repair
BC1001_3728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bug03021
]
BC1001_3728
03036 Chromosome and associated proteins [BR:
bug03036
]
BC1001_3728
03400 DNA repair and recombination proteins [BR:
bug03400
]
BC1001_3728
Enzymes [BR:
bug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BC1001_3728
Transcription machinery [BR:
bug03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BC1001_3728
Chromosome and associated proteins [BR:
bug03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BC1001_3728
DNA repair and recombination proteins [BR:
bug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BC1001_3728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADX57140
LinkDB
All DBs
Position
2:complement(150091..152355)
Genome browser
AA seq
754 aa
AA seq
DB search
MTYVVAVRAMCEFTARRGDLDLRFTPAPTSLEGMAGHVTVAGRRASGYESEITLTATHRN
LTVRGRADGYDPAQNRLEEIKTHRGDLERMPANHRALHWAQARVYGHLLCRARGLGGLTV
ALVYFDVGSQKETLLTQTHSARELEIFFVEQCERFLDWAVQEEAHRAARNAALSALQFPH
AQFRSGQRELAVSVYRAARDGKPLMAQAPTGIGKTLATIFPLLKACAAEHIDRVFFLTAK
TPGRALALDAIETLRRSAAPLPLRTLELVARDKACEHPDKACNGESCPLARGFYDRLDAA
RSAALAGARLDRAAVREAALAHDVCPYYLAQELARWADVVVGDYNYYYDSSAMLYALTQI
NAWRVGVLVDEAHNLLDRARRMYTASLDQAALRLARKTAPPTLRKPLERLQREWNAVKRA
QAASYQVYDEVPGKLLSAAQNLIGAVTDQLAEAPLSIDETGLRFFFDAMHFVALAEQFGE
HSIVDITLTTDRHAPRDKTSCVICVRNVIPAPFLASRYAAARTTVMFSGTLTPHHFYRDT
LGLARDTPWLDVEGPFRAEQLQVKVAGNVSTRWRDRERSLEPIVDLIARQYAVKPGNYLG
FLSSFEYLQQIVALMRERHPGVPVWAQEPGMDEAARDAFLARFRTTSQGVGFAVLGGAFS
EGVDLVGQQLIGAFIATLGLPQMNEVNEEMRRTMEARFGSGYEYMYLYPGLQKVVQAAGR
VIRTEHDEGVVHLIDDRYRRPEVRRLLPRWWQVQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgtcgtcgccgtacgagcgatgtgcgagttcaccgcaagacgcggcgacctc
gatctgcggtttacgccggcgcccacttcgctggaaggcatggcgggccatgtgaccgtc
gccgggcgccgtgcgagcggctacgaaagcgaaatcacgctgacggctacgcatcgcaac
ctgacggttcggggccgcgctgacggctacgaccctgcgcagaaccgcctcgaagagatc
aagacccatcgcggcgatctggagcgcatgcccgcgaatcaccgcgcgctgcactgggcg
caggcacgggtgtacggacatttgctgtgccgcgcgcgtgggctgggcggcttgacggtc
gcgctggtttatttcgatgtgggcagtcagaaagaaacgttgctcacgcaaacgcatagc
gcgcgcgagcttgaaattttcttcgtcgaacagtgcgaacggtttctcgactgggccgtg
caggaagaagcgcatcgtgccgcgcgcaatgcggcgctgagtgcactgcagttcccgcat
gcgcagtttcgtagtgggcagcgggagctcgcggtgtccgtgtatcgcgccgcgcgcgac
ggcaaaccgctgatggcgcaggcgcccaccggcatcggcaagacgctcgccacgatcttt
ccgttgctgaaggcgtgcgcggcagagcacatcgaccgcgtgttttttctcactgcgaaa
acgccgggccgcgcgctggcgctcgacgccatagaaacgctgcgtcggagcgcggcgccg
ttgccgttgagaacgcttgaactcgtagcgcgcgacaaagcctgcgaacatcccgacaaa
gcctgcaacggcgagtcgtgtccgcttgcgcgcggcttttatgaccggctcgacgcggcg
cgcagcgcggcgctcgcgggcgcacgtctcgatcgtgcggcagtgcgcgaagcagcgctc
gcccatgacgtgtgtccctattacctcgcgcaggaactcgcgcgctgggccgacgtcgtg
gtgggcgactacaactactactacgacagcagtgcgatgctgtacgcgctcacgcagatc
aacgcgtggcgcgtgggcgtgctggtcgatgaggcgcacaatctgctcgaccgcgcgcgc
cgcatgtatacggcgtcgctcgatcaggccgcgttgcggctcgcgcgcaagaccgcgccg
ccaacgttgcgaaagccgctcgagcgtttgcagcgcgaatggaatgcggtcaagcgcgcg
caagccgcttcgtatcaggtgtacgacgaggtgccgggcaagctgctgtccgccgcgcag
aatctgatcggcgcggtcacggatcagcttgccgaagcgccgctttccatcgacgagaca
gggctgcgattctttttcgacgccatgcattttgtcgcgctcgccgagcagttcggcgag
cattcgattgtcgacatcacgctcacgacagaccgtcacgcgccgcgcgacaaaaccagt
tgcgtgatctgcgtacgcaatgtgattcccgcgccgtttctcgcgtcacgttatgcggcg
gcgcgcacgacggtgatgttctccggcacgctcacgccgcatcatttctaccgcgatacg
ctcggcctcgccagagacacaccatggctcgatgtcgaaggtccgtttcgcgcagaacag
ttgcaggtgaaggtggcgggcaacgtgtcgacgcgctggcgcgatcgcgagcgttcgctc
gagcccatcgtcgatctgattgcgaggcagtatgcggtgaagcccggcaattacctgggt
ttcctgagcagtttcgagtacttgcagcagatcgtcgcgctgatgcgcgagcggcatccc
ggcgtgcccgtctgggcgcaggagccgggcatggacgaagcggcccgcgacgcttttctt
gcacgctttcgcacaacgagtcagggcgtcggctttgccgtgctgggcggcgcgttttcc
gaaggcgtcgatctcgtcgggcagcagttgatcggcgcctttatcgcgacgctcggcttg
ccgcaaatgaacgaagtgaacgaagagatgcgccgcacgatggaggcgcgtttcggcagt
ggctacgaatacatgtacctgtaccccggtttgcagaaggtggtgcaggcggcggggcgc
gtgatccgcacggagcacgacgagggcgtcgtgcatctgatcgacgaccgttacaggcgg
cccgaggtgcgccgcctgttgccccgctggtggcaggttcagtag
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