Burkholderia sp. CCGE1001: BC1001_3939
Help
Entry
BC1001_3939 CDS
T01424
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bug03000
]
BC1001_3939
Transcription factors [BR:
bug03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BC1001_3939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ADX57350
LinkDB
All DBs
Position
2:complement(383577..384563)
Genome browser
AA seq
328 aa
AA seq
DB search
MNFVRSLTLRQLQIFVVASRYTSFARAAEELHLTQPAVSMQIHQLEEAVGLRLFERIARK
LTLTEAGEKFSHHASRILGEIKDAEDAMTSLKQADSGSIAVGIVSSATYFAPKLLAMYSH
IYPKVDVHFSVGNRDALLRLLQDNAIDLAIMGRPPPELDTTTEPLAWHPQVVIAPVDHPL
AGARRFDLQELRGDTFLVREPGSGTRMAAEEMFRQHLFTPAKVVTLGSNETIKQAVMAGM
GVSLISLHTLLLELRTKEIALLDVNGTPIERTWQIVHLRAKQLSPTCMIFRQFLLEEAAA
YLEREYAAFVPSPGKSKGLLKAVDDASA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttcgtccgctcgctcacgctgcgtcaactgcagatcttcgtcgtggcgagccgc
tatacgagcttcgcgcgcgcagcggaagagttgcatctgacgcagccggcggtctcgatg
cagatccatcaactggaagaagccgtgggcctgcgcctcttcgagcgcatcgcgcgcaag
ctcacactgacggaggccggcgagaagttcagtcaccacgcgagccgcattctcggcgag
atcaaggacgccgaagacgcgatgacctcgctcaagcaggccgacagcggctcgatcgcg
gtggggatagtcagttctgcgacctatttcgcgcccaagctgctcgcgatgtactcgcac
atctacccgaaggtggatgtgcatttctcggtgggcaatcgcgacgcgcttctgcgcctg
ttgcaggacaacgcgatcgacctcgcgatcatggggcgcccgccacccgagctcgacacg
acgaccgagccgctcgcatggcatccgcaagtggtgatcgcgccggtggatcatccgctc
gccggcgcgcggcgtttcgatttgcaggagctgcgcggcgacacgtttcttgtgcgcgag
ccgggctcagggacacgcatggccgcggaggaaatgttccggcagcatctcttcacgccg
gcgaaagtcgtcacgctgggcagtaacgaaacgatcaagcaggcagtcatggcgggcatg
ggcgtgagcctgatttcgctgcatacgctgctgctcgaactgcggacgaaggaaatcgcc
ttgctcgatgtgaacggcacgccgatcgagcgcacatggcagatcgtgcatttgcgcgcc
aagcagctttcgccgacctgcatgattttccgccagtttctgctcgaagaggccgcggct
tatctggagcgcgagtatgcggcgttcgtgccgtcgcccggcaagtcgaagggactgctg
aaggccgtggacgacgcgtccgcctga
DBGET
integrated database retrieval system
