Burkholderia sp. CCGE1001: BC1001_4205
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Entry
BC1001_4205 CDS
T01424
Name
(GenBank) outer membrane porin
Organism
bug
Burkholderia sp. CCGE1001
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
ADX57608
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Position
2:679017..680579
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AA seq
520 aa
AA seq
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MKNNTPRTRSKKSGVTAAICCAFTVPALAIAANAYADDSVTPPAPEASNAAPAAQALSSP
AQVSQAQPANKRRADQGGQIRNDQPDTTNALVNAEASQTVTPPEPPSSQAASKGFIADSH
LNLQLRNYADYFQAPPNLYRHAWVQGAQVNYESGFTQGLVGFGVDASLFGAFKLDGGNGA
GNMVHVGKSGGGSQQLAWAYPGMYDIKGRISETVVKYGLQDVTNPFLEPHDNRALPPTFL
GVSVVSNDLVHTTLEAGSFTKVDARGHTNLTNLTTSYGGTRIDRLTYLGGTWHYAKNGEM
SLYVDQADDVWRQYYGSVSQSFGDPTTIKWSGLANIYSTHDTGASRQGHINSNAYSLSVS
AQHGPHALLLGYQQVLGDQFFDYVNETNGIYLTNSMDVDYNAPHEQSLQLRYTFDGKYAG
VPGLKAMLWGAYGWGADASAGAAENASPSAALHDLYWKNGQPVHGHHHEFGFIPSYTLQS
GRFKDTKVTFIAMWHNGSAYYSDGNNMEYRLVVNVPVKVF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaacacaccacgaacccggtcgaaaaagtccggagtcactgccgcgatctgc
tgtgccttcaccgttcccgcgctggctatcgccgcgaacgcctacgccgacgacagcgtg
acgccgcccgcgcccgaagcgagcaacgccgcgcccgccgcacaagcgttgtcgtcgccc
gcgcaggtgtcgcaggctcaacctgcgaacaagcgccgcgcggatcagggcgggcagatc
cgcaacgatcagccggacacgacgaacgccctcgtcaacgcggaagcttctcaaaccgtc
acgccgcccgagccgccgtcgagccaggccgcgagcaagggctttatcgcggatagccat
ttgaatctgcaattgcgcaattacgcggattacttccaggcgccgcccaacctctaccgc
catgcgtgggtgcaaggtgctcaggtcaactatgaatcgggtttcacgcaagggctcgtc
ggcttcggcgtggatgcgtcgctattcggcgcattcaagctcgacggcggcaacggcgcg
ggcaacatggtgcacgtcggcaaaagcggcggcggctcgcagcagctcgcgtgggcgtac
ccgggcatgtacgacatcaagggacgtatttcggaaacggtcgtcaaatacggcctgcag
gacgtgacgaatccgtttctcgagccgcacgacaaccgcgcgttgccgcccactttcctc
ggcgtctccgtcgtcagcaacgatctggttcacaccacgctcgaggccggcagcttcacc
aaggtcgacgcacgcggccacacgaacctcaccaatctgaccacctcgtacggcggcacg
cgcatcgaccggctgacgtatctgggcggcacctggcactatgcgaagaacggcgagatg
tcgctttacgtcgaccaggcggacgatgtctggcgtcaatactacggttcggtctcgcag
tcgttcggcgatccgaccacgatcaagtggagcgggctcgccaacatctactcgacgcac
gacaccggcgcgtcgcgccaagggcacatcaacagcaatgcgtatagcctctccgtgtcc
gcgcaacacgggccgcacgcgctgctgctcggctatcagcaggtgctcggcgaccagttc
ttcgactacgtgaacgagaccaacggcatctatctcaccaactcgatggacgtcgactac
aacgcgccgcacgagcaatcgctgcaattgcgctatacgttcgacggaaaatacgcgggc
gtgcccggactcaaggcgatgttgtggggcgcgtatggctggggcgccgatgcatcggcg
ggcgctgcggagaatgcgtcgccgagcgccgcgctgcacgatctgtactggaagaacggc
cagcccgtgcacggccatcatcacgagttcggcttcattccgagctatacgctgcaaagc
ggccgcttcaaggacacgaaggtcacgttcatcgccatgtggcacaacggcagcgcttac
tactcggacggcaacaacatggaataccgtctggtcgtgaatgtgccggtgaaagtgttc
tga
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