Burkholderia sp. CCGE1001: BC1001_4577
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Entry
BC1001_4577 CDS
T01424
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug00100
Steroid biosynthesis
bug00909
Sesquiterpenoid and triterpenoid biosynthesis
bug01100
Metabolic pathways
bug01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
BC1001_4577
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
BC1001_4577
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bug01006
]
BC1001_4577
Enzymes [BR:
bug01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
BC1001_4577
Prenyltransferases [BR:
bug01006
]
Terpene biosynthesis
Squalene/phytoene synthase
BC1001_4577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ADX57966
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All DBs
Position
2:complement(1102843..1103889)
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AA seq
348 aa
AA seq
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MPTPTRAFLLGPLLKGVSRSFYLTLRVLPAGMRDPIGLAYLLARAADTIADTSLIAPGQR
LQLLLSLRDQVNGVASDGALFQRMAAEVAGQQSQSDEKVLLESLGPALQVLAQLSESDRK
AVREIVSTLTEGMEFDLRTFPDERSGRIAALREYGELDRYTYLVAGCVGEFWTAMTYAHM
PGTLKERPDIMATRGVRFGKALQMTNVLRDCGRDLRIGRCYLPQSMLEQHGLSPQDLLLP
ANSLRARPLMIELLRNTLDHFREALDYTLAIPALSVRLRLACLWPILIGLETLLLLVDNA
AWLDPQRVSKVSRNKVYRIIASSLLVVPSNARVRQAIEQRIRDIEARF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccgactccgacccgggcctttcttctcggcccgctcctgaaaggcgtatcacgctcg
ttctacctcacgctgcgcgtattgccggcaggcatgcgcgatcccatcggccttgcgtat
ctgctggcgcgggccgcggataccatcgcggatacctcgctgattgcgcccgggcagcgc
ctccagttgctgctctcgttacgcgatcaggtcaacggcgtcgcgagcgacggcgcgctg
ttccagcgcatggccgcggaagtggcgggccagcagagccagtcggacgagaaggtattg
ctcgaatcactcggcccggcgctccaagtgctcgcgcaattgagcgagtccgaccgcaag
gccgtgcgcgagatcgtctcgacgttgaccgaaggcatggaattcgacttgcgcacattt
cccgacgaacgctcagggcgaattgccgcgctgcgcgagtatggcgagctggaccgttat
acgtatctggtggccggttgcgtcggcgaattctggactgcgatgacttacgcgcatatg
cccggcacgctgaaggagcgccctgacatcatggcaacgcgcggcgtgcgcttcggcaag
gcgctgcaaatgaccaatgtgttgcgcgattgcggaagggatctgcgaattggccgctgt
tatctcccgcaaagcatgctggagcagcacggcctgagtccgcaagacctcttgctgccg
gccaattccttgcgcgcgcgtccgctgatgatcgagctgttgcgcaacacgctcgatcat
ttccgcgaagcgctcgattacacgctcgcgattccggcattgtccgtgcggctgcggctg
gcgtgcttgtggcccattctgatcggcctcgaaacgctgctgctgctcgtggacaacgct
gcgtggctcgatccgcagcgggtttcgaaagtgtcgcgcaacaaggtgtatcggatcatt
gcgtcgtcgctgctcgtcgtgccgtcgaatgcgcgggtgcgccaggcgatagagcagcgt
atccgcgacattgaagcgaggttctga
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