Burkholderia sp. CCGE1001: BC1001_4855
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Entry
BC1001_4855 CDS
T01424
Name
(GenBank) spermidine/putrescine ABC transporter ATPase subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1001_4855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bug02000
]
BC1001_4855
Transporters [BR:
bug02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BC1001_4855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
nSTAND_NTPase5
nSTAND3
AAA_25
AAA_22
AAA_29
DO-GTPase2
Rad17
Motif
Other DBs
NCBI-ProteinID:
ADX58239
LinkDB
All DBs
Position
2:1410037..1411149
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AA seq
370 aa
AA seq
DB search
MKTDEVIVSFRGVRKTYDGETLVVKQLDLDIYQGEFLTLLGPSGSGKTTCLMMLAGFEFP
TGGEIWLDGTLLNTVPPHKRNIGMVFQNYALFPHLTVEQNVAYPLTVRKVSAEERAHRTH
NALKMVRMESFAKRYPAQLSGGQQQRIALARALVFEPKLVLMDEPLGALDKQLREHMQYE
LKSLHEKLGVTFVYVTHDQGEALTMSDRVAVFDKGIVQQLDTVDSLYESPCNEFVANFIG
DSNKLRGTIANVNGEYCEFHLADGTRLTGRNIGGARAGTPAIACIRPERMKLATGVNGNG
AARPGANALAGEARGLIYFGDHVRMRCGLPQQDECFVKVPLGTDALESFTPGAPVALEFA
PDHLRVFAGA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggatgaagtgatcgtcagctttcgaggcgtgcgcaagacgtacgacggcgaa
acgctggtcgtcaagcaactggatctggacatctatcagggtgaattcctgacgctgctc
gggccgtcgggttccggcaagaccacctgcctgatgatgctggccggcttcgaatttccc
accggcggcgagatctggctcgacggcacgctgctcaataccgtgccgccgcataagcgc
aacatcggcatggtgtttcagaactacgcgctgtttccgcatctcacggtcgagcagaac
gtcgcctatccgctgaccgtgcgcaaggtctccgccgaagagcgcgcgcaccgcacccac
aacgcattgaagatggtgcgcatggagagcttcgcgaagcgttatccggcgcagctgtcg
ggcggccagcagcagcgcattgcgcttgcacgggcgctcgtgttcgagccgaagctcgtg
ttgatggacgagccgctcggcgcgctcgacaagcagttgcgcgaacacatgcagtacgaa
ctgaagtcgctgcacgagaagctcggcgtgacctttgtctacgtcacgcacgatcagggc
gaggcgctgaccatgtcggaccgcgttgccgtattcgacaagggcatcgtgcagcagctc
gataccgtggacagtctgtacgaatcgccttgcaacgagttcgtggcgaacttcattggc
gacagcaacaagctgcgcggcacgatagcgaacgtgaacggcgagtattgcgagtttcat
ctggccgacggcacgcggctgaccggccgcaacatcggcggcgcgcgggcgggaacgccg
gccattgcctgcatccggccggaacgcatgaagctcgcgacgggcgtcaacggcaacggc
gcggcacggccgggcgccaatgcactggccggcgaggcgcgcgggcttatctatttcggc
gatcacgtgcgcatgcgctgcggtttgccgcagcaggacgagtgcttcgtcaaggtgccg
ctcggcaccgacgcgctcgaatccttcacgcctggcgcgccggtggcgctcgagttcgcg
cccgaccatctgcgggtattcgcgggggcgtaa
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