Burkholderia sp. CCGE1001: BC1001_4947
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Entry
BC1001_4947 CDS
T01424
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug03030
DNA replication
bug03410
Base excision repair
bug03420
Nucleotide excision repair
bug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BC1001_4947
03410 Base excision repair
BC1001_4947
03420 Nucleotide excision repair
BC1001_4947
03440 Homologous recombination
BC1001_4947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bug03032
]
BC1001_4947
03400 DNA repair and recombination proteins [BR:
bug03400
]
BC1001_4947
Enzymes [BR:
bug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BC1001_4947
DNA replication proteins [BR:
bug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BC1001_4947
DNA repair and recombination proteins [BR:
bug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BC1001_4947
NER (nucleotide excision repair)
GGR (global genome repair) factors
BC1001_4947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ADX58329
LinkDB
All DBs
Position
2:1520394..1523135
Genome browser
AA seq
913 aa
AA seq
DB search
MPEERSLEGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGMINMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYPDYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIDGVEADDV
IGTLSTEAEKRGMNVIVSTGDKDLAQLVSDHVTLINTMTNEKLDRAGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTALKWLTQYESLDGIVAHAGEIKGAVGDNLRRALDFLP
MARKLVTVERHCDLTDHIASIEENLQSRPESREELRDVFTRHGFKTWLREVEIADAVEGP
ETDVPPALTVDRERHYETVQTWHQFDAWLQRVEAAELTSFDTETTSLDPMTAQIVGLSFA
VEAGHAAYVPVAHRGPDAPVQLPRDEVLAKLKPWLESAKHKKVGQHLKYDEQVLANYGIE
MRGIEHDTLLQSYVLESHRPHDMDNLALRHLGVKTIKYEDVAGKGAQQIGFDEVALDKAA
EYAAEDADITLRLHQTLYPQLAAEKTLEHVYRDIEVPTSRVLRKMERTGVLIDAEKLRLQ
SSEIAARLIELESEAYVLAGGEFNLGSPKQIGQIFFERLELPVVKKTPSGAPSTDEEVLQ
KLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNASTGRVHTNYAQAVAVTGRLASNDPN
LQNIPVRTGEGRRIREAFIAPPGHKLVSADYSQIELRIMAHISGDESLLRAFSQGEDIHR
ATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARY
PGVARYMDETRLSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL
IKLSMIAVQKWIEESNIGTRMIMQVHDELILEVPDEELPEVRKRLPELMCGVAALKVPLV
AEVGAGLNWEEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaagccttgaaggtaagaccctgctattggtcgacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatctgcgcgggcccgacggtggccccacgggt
gcgctctacgggatgatcaacatgctgcggcgcatgcgcaaggaagtcacagcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaacgtttcgcgacgactggtatcccgactac
aaggcgaatcgtccttccatgcccgacgatctctcgcggcagatcgagccgatccatgtg
gccgtgcgcgcgctcggctggccgctcctgatgatcgacggcgtggaagccgacgacgtg
atcggcacgctcagcaccgaggcggaaaagcgcggcatgaacgtgatcgtgtcgactggg
gacaaggatctggcgcagctcgtgtcggatcatgtcaccctcatcaatacgatgaccaac
gaaaaactcgaccgcgccggcgtgctcgccaagttcggcgtgccgccggagcgcattgtc
gactacctgtcgctaatcggcgataccgtcgacaacgtgccgggcgtcgagaaatgcggg
ccgaaaaccgcgctgaaatggcttacgcaatacgagtcgctggatggcatcgtcgcacat
gccggcgagatcaaaggtgcggtaggagacaatctgcgacgcgcgctggatttcctgccg
atggcgcgcaagctcgtcaccgtcgagcgccattgcgatctgaccgatcacatcgcgtcc
atcgaggaaaacttgcaaagccgccccgagtcgcgggaggaactgcgcgacgtgttcacg
cgccacggcttcaagacctggctgcgcgaggtcgaaattgccgacgcggtggaagggccg
gaaaccgatgtgccgcccgcgctcaccgtcgaccgcgaacgtcactatgaaaccgtgcag
acttggcaccaattcgacgcgtggctgcaaagagtcgaagcggcagagctgacttcgttc
gacaccgagactacgtcgctcgatccgatgaccgcgcagatcgtgggcttgtcgttcgcg
gtcgaagcggggcatgccgcgtatgtgccggttgcgcatcgcggcccggacgcgccggtg
caactgccgcgcgacgaagtgctcgcgaagctcaagccgtggctcgaaagcgcgaagcac
aagaaggtcggtcagcacctgaagtacgacgaacaggtgctcgccaactacggcattgaa
atgcgcggcatcgagcacgacacgctgctgcaatcgtacgtgctggaatcgcaccgcccg
cacgacatggacaacctcgcgttgcgccatctcggcgtgaagacgatcaagtacgaagac
gttgcgggcaagggcgcgcagcaaataggcttcgacgaagttgcgctcgacaaagccgcc
gaatacgcggcggaagacgccgacatcacgttgcgtctgcatcaaacgctgtacccgcag
ctcgccgcggaaaagacgctcgagcatgtgtaccgcgacattgaagtgcccacgtcgcgc
gtgttgcgcaaaatggagcgcacgggcgtgttgatcgacgcggaaaaactgcgtctgcag
agtagcgaaatcgccgcgcgcctgatcgagctggaaagcgaggcgtatgtgctggcgggc
ggcgagttcaacctcggttcgcccaagcagatcggccagatttttttcgagcggctggag
ttgccggtcgtcaagaagacgccgagcggtgcaccttccaccgacgaagaagtgctgcaa
aaactcgccgaagattatccgctgcccaaaatcctgctggaacatcgcggcttgtcgaag
ctgaagtccacctacaccgacaaactgccgcgcatggtcaatgcaagcacgggtcgcgtg
cataccaactatgcgcaggccgtcgcggtgacggggcgtctcgcgtcgaatgatcctaac
ctgcagaacattccggtgcgcaccggcgaaggccgccgcattcgcgaggcctttatcgcg
ccgccgggccacaagctcgtttccgcggattactcgcaaatcgagctgcgcatcatggcg
catatttcgggcgacgaatcattgctgcgcgccttctcgcagggcgaagacattcaccgc
gcgaccgccgcggaaattttcagcgtgacgccgctggaagtgtcgaacgatcagcggcgt
gtggccaaggtcatcaacttcggcctgatttacggcatgagctcgttcggccttgcgtcg
aacctgggcattacgcgcgatgccgcgaagctgtacatcgaccgctatttcgcgcgttac
cccggcgtcgctcgttatatggacgagacgcgtctgagcgcgaaagccaagggttatgtg
gaaaccgtgttcggccgccgcctgtggctgccggaaatcaacggcggcaatggtccgcgc
cgccaggccgcggagcgcgcggccattaacgcgccgatgcagggcacggccgccgacctg
atcaaactctccatgatcgcggtgcagaagtggatcgaagaatcgaacatcggcacgcgc
atgatcatgcaggtgcacgacgaactgattctcgaagtccccgacgaagaactgcccgag
gtccgcaagcgtctgcccgagctcatgtgcggcgtggccgcgctgaaagtgccgctcgtc
gcggaagtcggcgcggggctcaactgggaagaagcgcattga
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