Burkholderia sp. CCGE1001: BC1001_4984
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Entry
BC1001_4984 CDS
T01424
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bug03000
]
BC1001_4984
Transcription factors [BR:
bug03000
]
Prokaryotic type
Helix-turn-helix
Other families
BC1001_4984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
PAS_4
HTH_23
HTH_30
HTH_29
HTH_28
AAA
HTH_7
AAA_5
HTH_17
HTH_Tnp_ISL3
HTH_22
AAA_16
AAA_7
Xre-like-HTH
HTH_1
AAA_2
Parvo_NS1
AAA_22
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
ADX58365
LinkDB
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Position
2:complement(1561516..1563489)
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AA seq
657 aa
AA seq
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MRDDTHHAVTPLASRDACWLTPSIQKSHERSEIFGLSESMRPDYDVLPAGELALKLEQNR
ILCAHATPVMETLHDQIVNTQSMIVLTDAEGLILHSIGDDDFLRRAEKVALRPGANWAEN
RQGTNAIGTALAERSATVVHGEQHYLAANRFLTCSSVPILDPYGDLIGVLDVTGDHRSYH
QHTMALAKMSVQMIENHLFANTFRETLQIAFHGRAEFLGTLMEGIAAFTCDGRFLSANRS
AQFQLGLPLAGLRAHTLSSLFGLTSAQLIDRLRTHRDRHLSLNLSNGAVVCANVQFRRST
LADEPARFHAPGQAAPAERSEPSAPPANPLSRLSYLDTGDPQIASVIAKVRKVIGKNIPI
LITGETGTGKELLAQAIHNDSPRRAGPFVAVNCASIPETLIESELFGYEEGAFTGARRKG
AVGKLLQANGGTLFLDEIGDMPYPLQVRLLRVLQERLVNPLGSAKSIPVDVAIICATHRD
LREMIAQGRFREDLYYRLNGLVVKLPPLRERTDLSAVIKKMLDCASAENAGGQPLSIADD
VMALFEQCAWPGNFRQLGNLLRTASVMVDPDGEIRREHLPDDFFDDLRAVGPSSAQGMDV
LPLPTGRLHDVAASVIANAVAQHGGNVSAAARMLGISRNTIYRKLPAQGANHSEDAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgacacgcatcacgccgtaaccccgctcgcctctcgcgacgcttgctggctg
acgccgtccattcaaaagtcgcatgaacgctcggaaatattcggcctgagcgagtccatg
cgccctgactacgacgtgctgcctgccggcgaactggcattgaaactggaacagaaccgc
attctctgcgcgcacgccacgccggtcatggaaaccctccatgatcagattgtgaacacc
cagagcatgatcgtcctgaccgacgcggaaggcctgattctccattccatcggcgacgac
gatttcctgcggcgcgccgagaaagtcgccctgcggcccggcgcgaactgggcggaaaac
cggcaaggcaccaatgctatcggcacggcgctcgccgagcgcagcgcaaccgtcgtccac
ggcgagcagcactatctggccgcgaaccgctttctcacctgctcgagcgtgccgattctc
gatccgtacggcgatctcatcggcgtgctggacgtgacgggcgaccatcgcagctatcac
cagcacaccatggcgctcgcgaaaatgtcggtgcagatgatcgagaatcatctgtttgcg
aacacctttcgcgaaaccttgcagatcgcctttcacggccgcgccgaatttctcggcacg
ttgatggaaggcatcgccgcctttacctgcgacggccgcttcctgtccgccaatcgcagc
gcgcagttccagctcggcctgccgcttgcgggattgcgcgcgcatacgctgtcgtcgctg
ttcggactcacgagcgcgcagttgatcgaccgtctgcgcacgcaccgcgaccgtcatctg
tcgctgaacctgagcaacggcgcagtggtctgcgcaaatgtgcagttccgccgcagcacg
ctcgccgacgagcccgcacgctttcacgcgcccggccaggcggcgccggccgagcgcagc
gagccatcggcgccgcccgccaatccgctgtcgaggctcagctatctggacaccggcgac
ccgcagattgcgtcggtcatcgcgaaggtgcgcaaggtgatcggcaagaacatcccgatc
ctgatcaccggcgaaaccggcaccggcaaggaactgctcgcccaggccattcacaacgat
tcgccgcgccgcgcggggccgttcgtcgcggtgaactgcgcgtcgatcccggaaacgttg
atcgaatcggaactgttcggctatgaagaaggcgccttcaccggcgcgcggcgcaaaggc
gcggtcggcaaactgctgcaggccaacggcggtacgctctttctcgacgaaatcggcgac
atgccctacccgttgcaggtgcggctcctgcgcgtgctgcaggagcgtctcgtgaatccg
ctcggctcagcaaagtcgattcccgtggacgtcgcgatcatttgcgccacccatcgcgat
ctgcgcgaaatgatcgcgcaaggccgtttccgcgaggatttgtactaccggctcaatgga
ctcgtcgtcaaattgccgccgttgcgcgagcgcaccgatttgtcggcggtgatcaaaaag
atgctggattgcgcgtcggcagagaacgcgggcggccagccgcttagcatcgccgacgac
gtcatggcgcttttcgagcaatgtgcgtggcccggcaacttccgccagctcggcaatcta
ctgcgcaccgcgtcggtcatggtggatccggacggcgaaattcgtcgcgagcatctgcct
gacgatttcttcgacgatctgcgcgccgtcggtccgtcgtccgcgcagggaatggacgta
ttgccgctgcccaccgggcggcttcacgacgtggccgcgagcgtgatcgcgaacgccgtc
gcgcagcacggcggcaacgtatcggccgcggcgcgcatgctcggcatttcgcgcaatacg
atttatcggaaactgcctgcgcaaggcgcgaaccacagcgaagacgcggcgtga
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