Burkholderia sp. CCGE1001: BC1001_5078
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Entry
BC1001_5078 CDS
T01424
Name
(GenBank) putative circadian clock protein, KaiC
KO
K08482
circadian clock protein KaiC
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
BC1001_5078
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
AAA_16
AAA_22
nSTAND3
IstB_IS21
RecA
GvpD_P-loop
AAA_19
MEDS
AAA_14
NPHP3_N
DnaB_C
AAA_7
AAA_29
AAA_24
DEAD
SLFN-g3_helicase
NACHT
AAA_18
AAA_30
TrwB_AAD_bind
CbiA
PAXNEB
ABC_tran
SRP54
Motif
Other DBs
NCBI-ProteinID:
ADX58459
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All DBs
Position
2:complement(1662127..1663638)
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AA seq
503 aa
AA seq
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MSKANHTTDRLRSGIDGIDDVLGGGFTPHRMYLVEGAPGTGKTTLALQFLLKGVEEGQTG
LYITLSETRSELISVADSHGWDLSQFHILELLSDEGLDPQFEQSVLHPAEVELGETVRNV
IRQVDEIKPARIVLDSLSELRLLSQNALRYRRQILALKRYFATRACTVLLLDDNTSDPSD
IQLHSIAHGVITLDNLVHDYGGNRRRVRIAKMRGIKFREGYHDFSLDTGGIKVYPRLVAA
EHHAEFDTALMSTGTPGLDVLLGGGLIPGTNALIVGPSGVGKTTTVVSCLIAALQRGERC
VYYVFDETLVTLIARCATVGMNLQPYVDSGLLTLRQIDPAEISPGEFATDVRVSVEQRGV
RYVAIDSLNAYLQAMPGERYLLLQMHELLGYLNQQGIITMLVLGQHGIIGEVQSDIDISY
LSDVVILFRYFEHHGEVLTAVTAVKSRANAHERSIRQFRLTETGVEVGEALRDFEGVLSG
LPAYRGSTALLGATDHVIDTSRQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagccaatcacacgactgaccgccttcgctcgggaatcgacggaatcgatgac
gtcctgggaggcggttttacgccgcaccgcatgtatctcgtggaaggcgcgcccggcacg
ggtaaaactaccctggccttgcaatttttacttaaaggcgtcgaggaaggccaaaccggt
ctgtacattacgctctcggagacgcgctcggagctgatctcggtcgccgacagccacggc
tgggacctgagccagttccatattctcgagctgctgtccgacgaggggctcgatccgcaa
ttcgagcaatcggtgctgcatcccgcggaggtcgagctgggcgaaacggtgcgcaacgtg
atccggcaagtcgacgaaatcaaacccgcgcgcatcgtcctcgacagtttgtcggaattg
cgcctgctgtcgcagaacgcgctgcgctaccggcggcagattcttgccctcaagcgctat
ttcgccacgcgcgcgtgcaccgtgctgctgctcgacgacaacacctcggatccgtcggac
attcagttgcatagcatcgcgcacggcgtgatcacgctcgataacctcgtgcacgactac
ggcggcaaccggcgccgcgtgcgcatcgccaagatgcgcggcatcaagtttcgcgagggc
tatcacgacttctcgctcgacacgggcggcatcaaggtctatccacgccttgtcgccgcg
gagcatcacgccgaattcgatacggcgttgatgagcaccggcacgccgggcctcgacgtg
ctgctcggcggcggcctgattccgggcaccaatgcgctgatcgtgggtccttcgggcgtc
ggcaaaaccaccacggtcgtctcatgtctgattgcggctcttcaacgaggcgagcgctgc
gtctattacgtattcgacgaaacgctcgtcacgctgatcgcgcggtgcgcgacggtcggc
atgaatctgcagccctatgtggatagcggcttgctcacgctgcgccagatcgacccggcc
gaaatctcgccgggcgaattcgcgaccgacgtgcgcgtctcggtcgaacaaaggggcgtg
agatacgtcgcgatcgacagcctgaacgcctacctgcaagccatgccgggcgagcgctac
ctgctgctgcagatgcacgaactgctcggctatctcaaccagcaaggcatcatcaccatg
ctggtgctcgggcagcacggcattatcggcgaggttcaaagcgatatcgacatcagctat
ctcagcgacgtcgtcatcctgttccgttacttcgagcatcatggcgaagtcctgaccgcc
gtgactgccgtgaagagtcgtgccaatgcccacgagcgttccatccgccagttcaggctg
acagagaccggcgtcgaggtgggcgaagcgctgcgcgatttcgaaggcgtgctctcgggg
ctgcccgcgtatcgcggcagcaccgcgctgctcggcgcgaccgaccacgtcatcgacaca
tcgcggcagtaa
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