Burkholderia sp. CCGE1001: BC1001_5247
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Entry
BC1001_5247 CDS
T01424
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1001_5247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bug02000
]
BC1001_5247
Transporters [BR:
bug02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BC1001_5247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ADX58628
LinkDB
All DBs
Position
2:complement(1861204..1862247)
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AA seq
347 aa
AA seq
DB search
MISMPRLRPFAMTLMLSVASMAPALAAGKITFVSQGGTYQEAQTKAILDPAAKELGITIN
QDSIPDAWPQIKAQAATGKPIWDVVDTPTSNCLRGGREGLLEKLDFAKLPNAAAMPEKYR
TPYSVAYEFYSTVIGYNKKTLKKTPQSWADFWNVKAFPGTRALRNDPQTVLEAALLADGV
PRDKLYPLDVDRAFRKLQQIKPDITVWWTSGGQSAQLLHDGEVDMTMIWNGRASAVRKDN
PDVDFTFNDGILQNTQLCVLKNAPNLNDAMRFLNTAVSPDLQANLPLYIDYGPGNPAAFK
TGKITPKRASELPSSPENAAKQALMSEDWWASDAGIQAKARWLKFMQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagcatgccaaggttgcgcccgttcgccatgactctgatgttgagcgtcgcgagc
atggcgcccgcgctcgccgcgggaaaaatcactttcgtgtcgcagggcggcacgtatcag
gaagcccagaccaaagccattctcgacccggcggcgaaggagctgggcatcaccatcaat
caggacagcattccggacgcgtggccgcagatcaaggcgcaggccgcgaccggcaaaccg
atctgggatgtggtggacacgcccacctcgaactgtctacgaggcggccgcgagggactg
ctcgaaaagctcgacttcgcgaagctccccaacgccgccgcgatgccggaaaaataccgc
acgccttattcggttgcgtacgagttctattcgacggtgatcggctacaacaagaagacg
ctgaaaaagacgccgcaaagctgggccgacttctggaatgtgaaggcattccccggcacg
cgggcgctgcgcaacgacccgcaaacagtacttgaagccgcgctgctcgcggacggcgtg
ccgcgcgacaagctctatccgctcgacgtggaccgcgcgttcaggaagctgcagcagatc
aagcccgacattacggtgtggtggacctccggcggccagtccgcgcaattgctgcacgac
ggcgaagtcgacatgacgatgatctggaacggccgcgcaagcgcggtgcgcaaggacaat
cccgatgtcgatttcaccttcaatgacggcattctgcaaaacacgcagttgtgcgtactg
aagaacgcgccgaatctgaacgacgccatgcgcttcctgaacaccgccgtttcgccggac
ctgcaagcgaatctgccgctttacatcgactatggtcccggcaatccggctgcgttcaag
accggcaagatcacgcccaagcgcgcgagcgaattgccaagctcgcccgagaatgctgca
aagcaggccttgatgtccgaagactggtgggcgtccgatgcaggcattcaggccaaagcg
cgctggctgaagttcatgcagtaa
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