KEGG   Burkholderia sp. CCGE1001: BC1001_5643
Entry
BC1001_5643       CDS       T01424                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
bug  Burkholderia sp. CCGE1001
Pathway
bug03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bug00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BC1001_5643
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bug02044]
    BC1001_5643
Secretion system [BR:bug02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BC1001_5643
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 Clp_N AAA_16 AAA_7 Sigma54_activat nSTAND3 AAA_30 NACHT TniB T2SSE SRP54 ResIII AAA_24 TMCO5 HB_ELP1 DUF815 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: ADX59017
LinkDB
Position
2:2295879..2298554
AA seq 891 aa
MSTSLNTLIAKLNPTCRQAALLAANNCLARGHYEVDLEHLLVALLDEPASDVALALRASR
IDSHALRADIERELQRFKSGNTRTPVFSKHLIDLLEQAWLIASLDSQIGRIRSGHLLLAL
LSAPDLAQFAERMSPLLRDVRVTDLKHKFDEVTAGSREAERSHDVPRAEEGADNPEVLAS
APGAPSSTPALDTYTSNLTQRAREGKIDPVIGREGEIRQTIDILMRRRQNNPIMTGEAGV
GKTAVVEGLALRIAADDVPAPLKGVALHVLDMGLLQAGASVKGEFENRLKNVIDEVKKSP
HPIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALA
RRFQVVKIEEPSETLAAAMLRGMASLMEKHFNVRVLDDAITEAVRLSHRYISGRQLPDKA
ISVLDTACAKVALAHSSTPAAIDDTKKRLERIDAEIAALEREAASGAQHEERLAQLRDLR
EEDLKHLAEDEARYDKERALVTEIVALRADIDAARVSSADADEAHKAQQAHETLALRVAE
LHALQGAEPMVPLQVDGHVVAEIVASWTGIPLGRMVKDEIQTVLNLQPLLAARVIGQDHA
LEAVAQRVRTASANLEDPNKPRGVFMFVGPSGVGKTETALALADVLYGGERKMVTINMSE
YQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDK
GTMDDAEGREIDFRNTLIILTSNVGSQAVMQACLNKSAEELPDADALAETLRPQLYKAFK
PAFLGRMKVVPYYPISDDVLAEIIELKLQRIRRRIESNHKAVFEWDESLVDAVLARCTEV
DSGARNVDHILNGTLLPEVAQHVLGRIANGATIERISVRATEAGDFDYAVV
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgagcacgtccctcaacaccctcatcgccaaactcaatccgacctgccgtcaggcagcg
ttgctggcggcgaacaactgtctcgcgcgcggtcactacgaggtggacctcgagcatctg
ctcgtggcgttgctcgacgaaccggcaagcgatgttgcgctcgcgctacgtgcaagcaga
atcgattcccatgcgttgcgcgcagatatagaacgtgaattgcagcgcttcaaaagcggc
aatacgcgcacgccggtgttctcgaaacatctgatcgatctgctcgaacaggcgtggctg
attgcatcgctcgattcacagatcgggcgcatccgttccggccatttgctgctcgcattg
ctgagcgcgccggatctcgcgcagttcgccgagcgcatgtcgccgcttttgcgggatgta
cgcgtgaccgatctgaagcacaaattcgacgaggtgacggcgggctcgcgagaagccgag
cgcagtcatgacgtcccacgcgcagaagaaggcgcggacaatccggaagttttggcttcg
gcgccgggcgcgccgtcgtcaacccccgcgctcgatacctacaccagcaacctcacgcag
cgcgcgcgcgaaggcaagatcgatccggtgatcggtcgcgaaggcgagattcggcagact
atcgacatcctgatgcggcgccgccagaacaatccgatcatgacgggcgaggccggtgtc
ggcaagacggcggtggtcgaaggtctcgcgctgcgcattgcggcagacgacgtgcccgct
ccgctcaaaggtgtggcactgcacgtgctcgacatgggcctcttgcaagctggcgcgagt
gtgaagggcgagttcgagaatcgcctgaaaaatgtgatcgacgaggtgaagaagagcccg
catccgatcattctgtttatcgacgaagcgcatacgatcatcggtgccggcggtcaggca
gggcaaaacgatgcggcaaatctactgaagcccgcgctcgcacgcggcgaactgcgaacg
attgcggcaacgacgtggagcgagtacaagaagtacttcgaaaaagacgccgcactcgcg
cgccgtttccaggtcgtgaagatcgaagagccgagcgagacgctcgcggcggccatgctg
cgcggtatggcgtcgctcatggaaaagcacttcaatgtgcgcgtgctcgacgacgccatc
acagaagccgtgcggctgtcgcatcgctacattagcggccggcaactgccggacaaggcg
atcagcgtgctcgacaccgcgtgtgcaaaagtggcgctcgcgcatagttcgacaccggcg
gcaatcgacgatacgaaaaagcgcctcgagcgcatcgacgcggaaattgccgcgctcgag
cgagaagcggcgagcggcgctcaacacgaggaacggctcgcgcaattgcgcgatctgcgc
gaagaagacctgaagcatcttgccgaagacgaggcacgctacgacaaggaacgtgcgctc
gttacggagatagtggcgctgcgcgcggacatcgacgcggcgcgcgtgagcagcgccgac
gccgacgaggcgcacaaagcacagcaggcgcacgaaaccctcgcgctgcgcgtggccgaa
ttgcatgcgctgcagggtgcagagcccatggtcccgctgcaggtagatgggcacgtggtg
gctgaaattgttgcgtcgtggacgggtattccgctcggccgcatggtcaaggacgaaatt
cagaccgtgttaaacctgcagccgctgcttgccgcgcgggtgatcggccaggaccatgcg
ctcgaagctgtcgcgcagcgggtgcgtacggccagtgccaatctggaagatccgaacaaa
ccgcgcggcgtgttcatgttcgtcggaccttcgggcgtcggcaagaccgaaacggccctc
gcactcgccgacgtgctgtacggcggcgagcgcaagatggtcaccatcaacatgagcgag
taccaggaagcccacagcgtctcgggtctcaaaggctcgccgcccggctacgtcggctat
ggcgagggcggagtcttgaccgaggcagtgcgccgcaatccgtattcggtggtgctgctc
gacgaagttgaaaaagcgcatcccgatgtactcgaaatgttttttcaggtgttcgacaaa
ggcacgatggacgacgccgaaggccgtgaaatcgactttcgcaatacgctcatcattctc
acgtcgaatgtcggttcgcaagcggtcatgcaggcttgtctgaacaagagcgccgaggag
ttgcccgatgccgacgcacttgccgaaacgttgcgtccgcaactgtacaaagcgtttaaa
ccggcatttctaggccgcatgaaagtggtgccgtactacccgatttccgacgacgtgctc
gccgagatcatcgaattgaagctgcagagaattcgccgccgtatcgaatcgaatcacaaa
gccgtgttcgagtgggacgagtcgctcgtcgatgcggtgctggcgcgctgcactgaagtg
gactccggcgcgcgcaacgtcgaccatattctgaacggcacgctgctgcctgaagtcgcg
cagcacgtgctgggacgaatcgcgaacggcgcgacaatcgagcgcatttcggtgcgcgcg
accgaagccggcgacttcgactatgccgttgtataa

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