Burkholderia sp. CCGE1001: BC1001_5777
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Entry
BC1001_5777 CDS
T01424
Name
(GenBank) SNF2-related protein
Organism
bug
Burkholderia sp. CCGE1001
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
ADX59144
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Position
2:2457010..2460537
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AA seq
1175 aa
AA seq
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MSSVFFDRERIADWLGDHTVAKARAVGPVSNVQWQGATLTGDVQGSQPQPYRTRVRFRTD
GGAPWAQSDCSCPVGRNCKHVAALLLAELEYHDEMDHIIRVDESEPDDTAFMAANEAGAD
SFGRQQGVRPELVSWLERFRARAEAADAAARKPGGARTETLVYRLNWSEFHMRHEVVLYR
ARCDTEGRIVEVGETWGDVESALLKQPRFVSDEDLSILRGLWLGRSREDFGQFILRGTSG
AETLQKLIATGRLFFDFRIAPGHDAPTPLARAADRPGRIEWEPLADERLRPVLCTEPRAS
MVLPTEPVWYVDGAAREAGVVRSSLPFQQLPDYLAMPPISLAEAPLVASVLREVAPELPL
PPTHDASAIRVIDVEPVPVLTLNSHALPSAGNAARASKGHAVELAGVSFDYDGVSINVDS
SVTLVPMPGGDVMHIRRRYEVEKKRLLELRKTGLQKVPTSRVFASRLLPETMLGLPDADA
WSAFVNEAVPELVAKGWRVTMAPEFRYNIIEIDAIDGTAHQAGDGWFDLEMGIRIGERTV
RLEPLLADLFRRDRRWLGGALEAIPDDEPIELKTDENKRLRLRADRLKPVVRVLVDLFDS
LGGTLADGTPLRVPSVDAGRLQALNDTGRWQFRGDDSIRRLAERLQAGPGLREVPVPSAL
RAQLRAYQQQGLNWMQYLREQGLAGVLADDMGLGKTVQTLAHILAEKEAGRLDQPALIIV
PTTLVHNWREEARRFAPELKVLVLNGPQRKDRFEQIGEHELILTTYALLWRDQKVLAEHQ
YHLLILDEAQYVKNATTKAAQAIRGLAARHRLCLTGTPLENHLGELWSQFDFLLPGFLGS
QKDFTRRWRNPIEKNNDGVRRSLLARRIRPFMLRRRKDEVAKELPAKTTIVCSVDLEGAQ
RDLYETVRTAMQEKVRAAVSAQGLARSHIIVLDALLKLRQVCCDPRLVRTLHGAEHSAAD
SAGEGADVSAGEAVKTHENSSDAPLRSSDKAERGARTTRSAKLDLLLSMLPELIEEGRRV
LLFSQFTGMLALIAEALDEAAIPYVILTGDTADRITPVERFQHGKVPLFLISLKAGGVGL
NLTAADTVIHYDPWWNPAAENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEQKAG
LADSILSEDAAGAAKFSDDDIDALFAPMPEVEGGK
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagttttctttgatcgggaacggattgcagactggctcggggaccacaccgtg
gccaaggcgcgcgcggtcggcccggtcagcaacgtgcagtggcagggcgccacgctgaca
ggcgacgtccagggcagccagccgcagccgtacaggacgcgcgtgcgctttcggacggac
ggcggcgccccttgggcgcagagcgactgcagctgtcctgtcggtcgcaattgcaagcat
gtggccgcgctgctgctcgccgaactcgagtatcacgacgagatggaccacatcatccgc
gtggacgaaagcgagcccgacgataccgcgttcatggcggccaacgaggccggggcggac
agctttggccggcagcagggcgtgcgtcccgaactcgtcagttggctggagcgctttcgt
gcccgcgccgaagccgccgacgccgccgcccgcaagccaggcggcgcgcgcaccgaaacc
ctcgtttaccggcttaactggtcggaattccacatgcggcatgaggtcgtgctgtaccgc
gcgcgctgcgacacggagggcagaatcgtcgaagtcggcgagacgtggggcgatgtggag
tcggcgctgctcaagcagcccaggttcgtatccgacgaagatctgtccattctgcgcggc
ctgtggctcgggcgttcgcgcgaagacttcgggcaattcattttgcgcgggacgagcggc
gccgagacgctgcaaaagctgatcgccaccgggcgcctgttcttcgacttcaggatcgcg
cccggtcatgacgcgcccacgccgctcgcacgcgcggccgaccggcccgggcgcatcgaa
tgggaaccgctcgccgacgagcggctgcgccccgttttgtgcaccgagccgcgcgccagc
atggtgctgcccacggagccggtctggtatgtggacggcgcagcccgggaggcgggcgtc
gtgcgctcctcgctgccgttccagcaattgcccgattacctcgccatgccgcctatctcg
ctcgccgaagcgccgctcgtcgcgtcggtgctgcgcgaggtcgcgccggagctgcccttg
ccgcccacccacgacgcgtccgcgattcgcgtgatcgacgtggaacccgtgccggtgctc
acgctgaacagccacgcgctgccctcggccgggaacgccgccagggccagcaagggccac
gcagtggaactggccggcgtgagcttcgactacgacggcgtcagcatcaacgtggacagc
agcgtgacgctcgtgccgatgccgggcggcgacgtcatgcatatccgccgccgctacgaa
gtcgagaaaaagcgcctgctcgaattgcgcaagaccggcttgcagaaagtgcccacgagc
cgcgtgttcgcgtcgcgtctgctgcccgaaaccatgctcggcttgccggatgccgacgcg
tggtccgcgttcgtcaacgaggccgtgccggagctcgtcgcgaaaggctggcgtgtgacg
atggcgccggagttccgctacaacatcatcgagatcgatgcgatcgacggcaccgctcat
caggcgggcgacggctggttcgatctggaaatgggcatccgcatcggcgagcgcacggtg
cggctcgaaccgctgctcgccgatctgtttcgccgcgaccggcgctggctgggcggcgcg
ctcgaagcgattcccgacgacgagcccatcgagctgaaaaccgatgaaaacaagcgcctg
aggctgcgcgcggaccgcctgaagcccgtagtgcgcgtgctggtcgacctgttcgattcg
ctcggcgggacgctcgccgacggcacgccgctgcgggtgccgtccgtcgacgcagggcgg
ctacaggcgctgaacgacaccgggcgctggcaatttcgcggcgacgattcgattcgccgg
cttgccgagcgcctgcaagccggtccaggcttgcgcgaggtgccggtgccgtccgcgctg
cgcgcgcaattgcgcgcttatcagcagcagggcctgaactggatgcagtatttgcgcgag
cagggtcttgccggcgtgctcgccgacgacatgggcctcggcaagaccgtgcaaacgctc
gcgcatattcttgccgagaaggaagcggggcggctcgaccaacccgcgctgatcatcgtg
cccaccacgctcgtgcacaactggcgggaagaagcgcggcgttttgcgcccgaattgaaa
gtgctggtgctgaacggcccgcagcgcaaggatcgtttcgagcagatcggcgaacacgaa
ctgattctgaccacgtacgccttgttatggcgcgatcagaaggtcctcgccgagcaccaa
taccacctgctgattctcgacgaagcgcaatacgtcaagaacgccacgacgaaggccgcg
caggcaattcgtggtttggccgcacgccaccgtttgtgtctgaccggcacgccgctcgaa
aatcacctcggcgaactctggtcgcaattcgatttcctgctgccgggctttctcggcagt
cagaaggacttcacgcgccgttggcgcaatccgatcgaaaagaacaacgacggcgtgcgc
cgctcgctgctcgcgcgccgcatccggccgttcatgctgcggcgtcgcaaggacgaggtc
gcgaaggagctgcctgcgaagacgacgattgtgtgctccgtcgatctggaaggcgcgcag
cgcgatctgtatgaaaccgtgcgcacagcgatgcaggagaaagtgcgcgcggcggtgagc
gcgcaaggcctcgcgcgcagtcacatcatcgtgctcgatgcgctgctgaagttgcggcaa
gtatgttgcgatccgcgtctcgtgcgtacgctgcatggagccgaacacagcgccgcagac
agcgccggtgagggcgccgatgtgagcgccggagaggccgtgaaaacgcacgaaaactca
agcgatgcgcctctgcgatcctccgataaagcggagaggggcgcgcgaaccacgcgttcg
gccaagctcgatctgctgctctcgatgctgcccgaactgatagaagaagggcgccgcgtg
ctgctcttctcgcagttcaccggcatgttggcgctgatcgcagaagcgctcgatgaagcc
gcgattccgtacgtcattctgaccggcgacacggcggaccgcatcacgccggtcgagcgc
ttccagcatggcaaggtgcccctgttcctgatcagcctgaaagcaggcggcgtgggcctg
aatctgactgcggccgataccgtgattcattacgacccgtggtggaaccccgccgccgaa
aatcaggctaccgaccgcgcgcatcggctcggccaggacaagcccgtgttcgtctacaag
ctgatcgcggcgggcagcatcgaggaaaagatcgtggaattgcaggagcagaaggcaggc
cttgccgacagcattctttccgaagacgccgctggcgccgccaaattttccgacgacgac
atcgacgcactatttgcgccgatgcccgaggtcgaaggcggaaagtga
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