Burkholderia sp. CCGE1001: BC1001_5827
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Entry
BC1001_5827 CDS
T01424
Name
(GenBank) sarcosine oxidase, alpha subunit family
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug00260
Glycine, serine and threonine metabolism
bug01100
Metabolic pathways
Module
bug_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BC1001_5827
Enzymes [BR:
bug01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BC1001_5827
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BC1001_5827
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
FAD_binding_2
Pyr_redox
HI0933_like
NAD_binding_7
GIDA
FAD_binding_3
AlaDh_PNT_C
XdhC_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ADX59192
LinkDB
All DBs
Position
2:2520463..2523465
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AA seq
1000 aa
AA seq
DB search
MSQKDRLPNGGRINRALPLTFTFNGRQYQGYQGDTLASALLANGLRFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVANSVNAKPSIEKDRMAVNQKIARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEQLDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLVDDQPELGGSLLSCRAEIDGKPALQWVHKIEDELRQMPDVKILS
RSTAFGYQDHNLVTVTQRLTDHLPVSQRKGTRELMWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRDAVVFTNNDDGYQCALDLKAAGAQVTVIDPRAGESKG
TLPALARRYGVKVISGAVITAAHGKLRVASVDVASYANGQVGAKQSELTCDLVAMSGGWS
PVLHLFAQSGGKAHWHDQKACFVPGKAMQAETSVGACNGDFTLGQGIRFAVDAGVEAARA
AGYIVKRPNAVQVAEISEAKMQPLWLVGGRELATRGPKQFVDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHVENGAEFEDVGNWKRPWYFPKKGEDLHAAVARESLAVRTSV
GILDASTLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLG
EQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
HDIDFANAAFPFMSYREGTVAGAASRVMRVSFSGELAYEVNVPANVGRAVWEALMAAGAE
YDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KAGRKQLVGLLADDPTFVIPEGSQIVAGPFQGDTAPMLGHVTSSYFSPILKRSIAMAVVK
GGLDKIGETVTIPLSSGKQIAAKITSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactcccgaatggcgggcgcatcaaccgcgcattgccgctcacg
ttcacattcaacggccgccagtaccagggctatcagggcgacacgctcgcctccgcgctg
ctcgcgaacgggctgcgtttcgttgcgcgcagctggaaatatcaccggccgcgcggcatc
gtgaccgcaggcgtggaagagccgaatgccgtcgtgcagctcgaaaccggcgcgtatacc
gtgccgaacgcgcgcgccaccgaagtcgagctgtatcaggggctcgtggcgaacagcgtg
aatgcgaagccgagcatcgagaaggatcgcatggcggtcaatcagaagatcgcgcgcttc
attcccgcgggtttctactacaagacgttcatgtggccgcgcaagttctggccgaaatac
gaggaagtcatccgcgacgcggcgggcctcggcaaggcgcccgaacaactcgacgccgat
cgctacgacaagtgcttcgcgcattgcgacgtgctggtggtcggcggcggaccgacgggt
ctcgcggccgcgcatgcggcggcgctctccggcgcgcgcgtcacgctcgtcgacgatcag
cccgaactgggcggctcgctgctgtcgtgccgcgcggagatcgacggtaagccggctttg
caatgggtacacaagatcgaagacgaactgcggcaaatgcccgacgtgaagatcctgtcg
cgcagcaccgcgttcggctatcaggatcacaacctcgtcacggtgacgcagcgtctcacc
gaccatctgcctgtgtcgcaacgcaagggcacgcgcgaactgatgtggaaaatccgcgcc
aaacgcgtgattctcgcgaccggtgcgcatgaacggccgatcgtcttcggcaacaacgat
ctgcccggcgtgatgctcgcgtcggccgtgtcgacgtatctgcatcgctatgcggtgctc
ccgggacgcgacgctgtcgtcttcacgaataacgacgacggttaccaatgtgcgctcgac
ctgaaggcggctggggcgcaagtgacggtgatcgacccgcgcgcgggcgaatcgaagggc
acgctgcccgcgctcgcacgccgctatggcgtcaaggtgatcagcggggcggtcatcacc
gcggcgcacggtaaattgcgcgtggcatccgtggatgtggcgtcgtatgcgaatggtcag
gtgggcgccaagcaaagcgaattgacctgcgacctcgtcgcgatgtccggcggctggagc
cccgtgctgcatctgttcgcgcaatcgggcggcaaggcgcactggcatgatcagaaggcc
tgtttcgtgccgggcaaggccatgcaggcagagacgagcgtgggcgcctgcaacggcgat
ttcacgctggggcagggcatccgcttcgcggtcgatgcaggcgtcgaagcggcgcgtgcc
gcgggttacatcgtcaagcggccgaatgcggtgcaggtggccgagatcagcgaagcgaag
atgcagccgctgtggctcgtcggcggacgcgaactcgccacgcgcgggccgaagcagttc
gtggacttccagaacgacgtctctgccgcggacattttccttgccgcgcgcgaaggtttc
gagtcggtcgaacacgtgaagcgttataccgcgatgggctttggcaccgatcagggcaag
ctcggcaacatcaacggcatggcgattctcgcgcaggcgctcggcaagacgattcccgag
accggcacgacgacgttccgcccgaactacacgccggtgaccttcggcacgttcgcaggg
cgcgagcttggcgagtttctcgatccggtgcgcaagaccgcggtgcacgaatggcacgtg
gaaaacggcgcggaattcgaggacgtcggtaactggaagcgtccctggtacttcccgaag
aaaggcgaagacctgcatgcggccgtcgcgcgcgaatcgctcgcagtgcgtacgagtgtc
ggcattctggacgcctcgacactcggcaagatcgacattcagggacccgattcggcaaag
ctgctgaactgggtctatacaaatccgtggagcaagctcgaagtgggcaagtgccgctac
ggcctcatgctcgacgaaaacggcatgatcttcgacgacggcgtgacggtgcgcctcggc
gaacagcactacatgatgacgaccaccaccggcggcgcggcgcgcgtgctgacgtggctc
gagcgctggctgcagacggagtggccggacatgcgggtgcgtctcgcatcggtcacggac
cactgggcgacgttcgccgtggtcggcccgaacagccgcaaggtgctgcagaaggtctgc
cacgacatcgacttcgcaaacgcggcgtttccgttcatgagctaccgggaaggcacggtg
gcgggtgcggcctcgcgtgtgatgcgtgtcagcttctcgggcgaactcgcctatgaagtg
aacgtgccggcgaacgtcggacgcgcggtgtgggaagcgttgatggccgcgggcgcggaa
tacgacatcacgccctacggcacggaaacgatgcacgtgttgcgggcagagaagggctat
atcatcgtcggccaggataccgacggttccatgacgccttacgacctcggcatgggcggg
ctcgtcgcgaagtcgaaagactttctcggcaagcgttcgctcacgcgctcggacaccgca
aaggcaggtcgcaagcaactggtcggactgctcgcggacgacccgaccttcgtgataccg
gaaggctcgcaaatcgttgcgggtccgttccagggcgacaccgcgccgatgctcggccac
gtcacgtcgagctacttcagcccgatcctgaagcgctccatcgcgatggcggtcgtgaag
ggcggactcgacaagatcggcgaaacggtcacgatcccgctttccagcggcaaacagata
gcagcgaagatcaccagctcggtgttctacgacagcgaaggagcgcgtcaacatgtggaa
tga
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