Burkholderia sp. CCGE1001: BC1001_PA6411
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Entry
BC1001_PA6411 CDS
T01424
Name
(GenBank) Outer membrane porin protein
KO
K03285
general bacterial porin, GBP family
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
BC1001_PA6411
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
AMD29359
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Position
pCCGE1001a:complement(298791..299951)
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AA seq
386 aa
AA seq
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MKKILLMLVLSGTFVVSVHAQSSVNLYGLVDTGLVYTNNQFGESNWQLNSSSTQNTVFGL
KGSEDLGGALHAIFKLEQGFLLNNGAQAFAGSAFGSQAWVGLQSDSYGIVTFGRQFDVSN
DLVGPLIAGYNTWGGSIAAHPFENDNLAANSVVANNSVKYASPTVSGVTFETMYSFSNKA
GDFANNRSYGFAVEYSQGPVNVAGGYVQFNNAGSGSGAVTTIDTSANFLAERQRVWSLGG
NYTYGPATMGLIWSHSQINNVGGVFSFGTGTYLGANDDSGGSLSGSLRLDNYEVNVKYAL
TPAWSVSGAYTYTHGAYNGTSPCWNTAMLQTDYVISKRTDLYLEGVYQNVHGAPADSVLS
HAMLNTLSPSSTNTQIAVTIGLRHTF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagattttgttgatgttggtgttatcaggaacttttgtggtttcggttcacgcg
cagagtagcgtgaacctttacggactggtcgatacaggcctcgtctacacgaacaatcag
ttcggcgaaagcaattggcaactgaacagcagttcgacgcaaaatacggtattcgggctc
aagggctctgaagatttgggcggcgccctgcatgcgatcttcaagctcgagcagggcttt
ctgctgaacaacggtgctcaggcctttgcgggcagtgccttcggatcgcaggcttgggtc
gggttgcaaagcgactcgtacggtatagtcacgttcggccgacagttcgacgtatcgaac
gacctcgttggcccgctcatagccgggtacaacacttggggtggcagcattgctgcgcat
ccgttcgagaacgacaaccttgccgcaaactcggtagtcgccaacaactcggtcaaatac
gcgagcccgaccgtgtccggcgtgacgtttgaaacgatgtactcgttcagcaacaaggct
ggtgacttcgcgaacaaccgctcatacggctttgcggttgaatatagccaaggcccggtg
aacgtcgcaggcggctacgtgcagtttaacaacgcaggcagcgggagcggcgcggtcacc
accattgacacgagcgcgaacttcctcgcagagcgtcagcgcgtgtggtcgctcggcggt
aactacacttatggcccagccacgatgggtctgatctggagccactcgcagattaacaac
gtcgggggcgtgttctcattcggcacgggcacctatcttggcgcgaacgacgattctggg
ggctcgctcagtgggtcgctgcgcctcgacaactacgaggtcaatgtgaagtacgcactt
acgccagcatggagcgtctcaggtgcctatacgtacacacatggcgcttacaacggcacc
agcccgtgctggaatacggcaatgttgcagacggactacgtcatcagcaagcgcaccgac
ttgtatctggaaggcgtgtatcagaatgtgcacggcgcgccggcggactccgtgctttcg
catgccatgcttaacacactctcgccctcgtcaaccaacacgcaaatcgccgtcacgata
ggcctgcgtcatacgttttga
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