Buchnera aphidicola Ua (Uroleucon ambrosiae): BUAMB_348
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Entry
BUAMB_348 CDS
T01830
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
buh
Buchnera aphidicola Ua (Uroleucon ambrosiae)
Pathway
buh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BUAMB_348 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buh03019
]
BUAMB_348 (deaD)
03009 Ribosome biogenesis [BR:
buh03009
]
BUAMB_348 (deaD)
Enzymes [BR:
buh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BUAMB_348 (deaD)
Messenger RNA biogenesis [BR:
buh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BUAMB_348 (deaD)
Ribosome biogenesis [BR:
buh03009
]
Prokaryotic type
rRNA helicases
BUAMB_348 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEO08159
UniProt:
G2LPM2
LinkDB
All DBs
Position
complement(392088..393896)
Genome browser
AA seq
602 aa
AA seq
DB search
MTHIESTFSVLGLNSFLIQSLNEMKYVKPSPIQAACIPLLLNGHDVLGMAQTGSGKTAAF
ALPLLHNLNINLTAPQILVLAPTRELAVQVAEAFSDFSKYMIGINVLPLYGGQRYDLQLR
ALRQGPQIVVGTPGRLLDHLKRGTLNLSNLHGLVLDEADEMLRMGFIEDVETIMTKIPKK
HQTALFSATMPEAIRRISKRFMNSPKEIKIQSNITTRPDIKQSYWMVYGRKTDALIRFLE
VEDFSATIIFVKTKNATLEVAEALEKNGYNSAALNGDMNQALREQTLERLKNGRLDILIA
TDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRTGRALLFVENRERRLLRNIE
YTIKQSIPEVQLPNIDLLCKRRLEKFSKKVQQQLESRDLDEYSALLDKLYSIDDLDIKTL
AAALLKMAQGERPLIIKKDLIKRPSPRESFLRDDRRREDKRNNNRLRRERRECKEIELYR
IEVGRNDGVEVRHIVGAIANEGNVHSRNIGNIKLFSSYSTIELPKGSSKDLLQKFARTRI
LNKLIHIKLLRDTRAYESKTSNRVILNRDKNSNRFISEKNTNKTNASKKNELKSSFSRRR
NI
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgactcatattgaaagcacattttctgttcttggtttaaattcttttcttattcaatct
ttaaacgaaatgaagtatgttaaaccttctcctattcaagcagcatgtattcctttgctt
ttaaatggacatgatgtattaggaatggctcaaacaggtagtggtaaaactgctgctttt
gcattacctttattacataatcttaatattaatttaacagcccctcaaattttagtttta
gctcctactagagaattagctgttcaagtagctgaagcattttcagatttttctaaatat
atgattggtattaatgtattacctttgtatggtggtcaaagatatgatttacaattgcgt
gctttacgacaaggtcctcaaattgtagtcggtactccaggtcgtttgttagatcattta
aaaagaggaacgcttaatctttccaacttacatggtttagttttagatgaagcagatgaa
atgttgcgtatgggatttatagaagatgtagaaacaattatgacaaaaattccaaaaaaa
catcaaactgcattattttcagctactatgccagaagctatacgtcgtatttccaaaaga
tttatgaatagtccaaaagaaataaaaatacaatcaaatattactacgcgtccagacata
aaacaaagttactggatggtatatggtcgaaaaactgatgcattaattcgttttttagaa
gtagaagatttttctgcaacaataatttttgtgaaaactaaaaatgcaactttagaagtt
gctgaagcattagaaaaaaacggatataatagtgctgcgttaaatggagatatgaatcaa
gcattaagagaacaaactttagaaagattaaaaaatggcagattagatattttaattgct
actgatgttgctgctcgtggtttagatgttgatcgtattagtttcgttattaattatgat
attccaatggattcagaatcgtatgtacatcgtataggtcgaacaggtcgagcaggtcga
acaggtcgagcattattatttgttgaaaaccgagaacgtcgtttattgcgtaatatagaa
tatactattaaacaatctattccagaagtacaattacctaatatagatttattatgtaaa
agacgtcttgaaaagttttcaaaaaaagttcaacaacaattagaaagtcgagatttagac
gaatatagtgctttattagataaattgtattcgatagatgatttagatattaaaacttta
gctgcagctttattaaaaatggcacaaggtgaacgtcccttaattattaaaaaagattta
attaaacgtccatctcctcgtgagagttttttaagagatgatcgtcgacgtgaagataaa
agaaataataatcgattacgtcgtgaacgtcgtgaatgtaaagaaatagagctatatcgt
atagaagtaggtcgtaatgatggtgttgaagtacgtcatatagttggagcaattgctaac
gaaggaaatgtgcatagtcgtaatatcggaaatattaaacttttttcttcttattctaca
attgaattgcctaaaggctcctcaaaagatttattacaaaaatttgctcgtactagaatt
ttgaataaattaattcacataaaattattacgagatactcgtgcttatgaaagtaaaaca
tctaatcgtgttatacttaatcgagataaaaatagtaatcgttttatttctgaaaagaat
acaaataaaactaacgcttctaaaaaaaatgaacttaaatcatcttttagtcgtcgtaga
aatatctag
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