Buchnera aphidicola Ua (Uroleucon ambrosiae): BUAMB_568
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Entry
BUAMB_568 CDS
T01830
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
buh
Buchnera aphidicola Ua (Uroleucon ambrosiae)
Pathway
buh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BUAMB_568 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
buh03021
]
BUAMB_568 (rho)
03019 Messenger RNA biogenesis [BR:
buh03019
]
BUAMB_568 (rho)
Transcription machinery [BR:
buh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BUAMB_568 (rho)
Messenger RNA biogenesis [BR:
buh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BUAMB_568 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_25
AAA_22
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AEO08353
UniProt:
G2LNN7
LinkDB
All DBs
Position
complement(600972..602231)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTALKNMPVSELITLGEKMGLENLARMRKQDIIFTILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTILLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELPLSRKIAEKRVFPAIDY
NRSGTRKEELLTLPDELQKMWILRKIIHPMSEIDAMEFLLNKLSMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttactgcacttaaaaatatgccagtttctgaattaattactcttggtgaaaaa
atggggttagaaaatttagcgcgtatgcgtaaacaagatattatttttacgattcttaaa
caacatgcaaaaagtggagaagatatatttggagatggtgttttagaaatacttcaagat
ggattcggatttttgcgttctgcagatagttcttatttagctggtcctgatgatatttat
gtttcaccaagtcaaattcgtagatttaatttacgtactggtgatactatttctggaaaa
attagaccacctaaagaaggcgaaagatatttcgctctgcttaaagttaatgaagtaaat
tatgataaaccagaaaacgcaagaagcaaaatattatttgaaaatctaacaccattacat
gctaattctagattgagaatggaacgtggtaacggatcaactgaagatttaacagcaaga
gttttagatttagcttctccaattggaagaggacaaagaggactaattgttgctcctcca
aaagcaggtaaaacaatattacttcaaaatattgcacaaagtattgcttataatcatcca
gattgtgttttaatggtcttgctaatcgatgaaagaccagaagaagtaactgaaatgcaa
agattagttaaaggtgaagtagttgcatctacctttgatgaaccagcatcgagacatgtt
caagtagccgaaatggtgattgaaaaagctaaaagattagtagaacataaaaaagatgta
attattttactagattctattacacgtttagcacgtgcttataatacggttgtaccggca
tctggaaaagttttaacaggtggagtagatgctaatgctttacatagacctaaaagattt
tttggtgctgcacgtaatgtagaagaaggaggaagtttaactattattgcaactgcatta
gtagatactggttctaaaatggatgaagtaatttatgaagaatttaagggaacaggtaat
atggagcttcctttatctagaaaaattgcagaaaaacgtgtatttccagcaattgattat
aatcgatctggaactagaaaagaagaattattaacattaccagatgaacttcaaaaaatg
tggattttaagaaaaatcattcatcccatgagtgaaatagatgcaatggaatttttatta
aataagctttctatgactaaaactaatgatgaattttttgatatgatgaaacgttcataa
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