Burkholderia sp. PAMC 28687: AX768_00745
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Entry
AX768_00745 CDS
T05699
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bui
Burkholderia sp. PAMC 28687
Pathway
bui03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AX768_00745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bui03400
]
AX768_00745
Enzymes [BR:
bui01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AX768_00745
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AX768_00745
DNA repair and recombination proteins [BR:
bui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AX768_00745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AMM12861
LinkDB
All DBs
Position
1:150270..151100
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AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIEPFVAGRRVERVDIRTPALRWPIPAHLSKTMKALKIDKVERRGKYL
LFETSEGWLIVHLGMTGTLRVLRNVPRPPDAAKHDHIDLIFDDFILRFRDPRRFGAVLWH
AREDGDVLDHPLLAGLGVEPFTAEFSGALLYRMTRGRKVSVKQALLAGTMVVGVGNIYAS
ESLFRAGIRPTVAAGRVSLVRYDLLADAVRTTLAAAIEKGGSTLRDFVGSNGESGYFQLD
YFVYDRAGLPCHVCGTAIKHIVQGQRSTYFCPRCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgccggaagtcgaagtaacccgacgcggtattgaaccgttcgttgccggc
cgccgtgtcgagcgtgtcgatatccgcacgcccgcgcttcgatggccgattcccgcgcat
ctttcaaagacgatgaaagcgctgaagatcgacaaggtcgagcgccgcggcaagtacctg
ctgttcgaaacctccgaaggttggctgatcgtgcatcttggcatgacgggaacgctgcgg
gtcttgcgtaacgtgccgcgcccgcccgatgctgcaaagcatgatcatatcgatttgatc
ttcgacgacttcattttgcgcttccgggatcctcggcgttttggcgccgtgctctggcat
gcgcgcgaagacggcgacgttctcgatcatccgctgcttgccggcctgggcgtcgagcca
tttaccgccgaattctccggcgcgctgctgtaccgcatgacccgcgggcgcaaggtgtcc
gtcaaacaggcgctgctcgcggggacgatggttgtgggcgtcggcaatatctatgcatcg
gagagcctgtttcgtgccggaatccggccgacagtcgccgcggggcgcgtctcgctcgtg
cgctacgatcttctcgccgacgccgtgcgcacgacgctcgcggcggccatcgaaaaaggc
ggcagtacgctgcgtgattttgtcggcagcaatggtgagtccggttatttccagctcgat
tatttcgtctatgatcgcgccggcctgccgtgccacgtttgcggcacggccatcaaacat
atcgtgcaaggccagcgatccacgtacttttgcccgcgctgccagcgctag
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