Burkholderia sp. PAMC 28687: AX768_05635
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Entry
AX768_05635 CDS
T05699
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bui
Burkholderia sp. PAMC 28687
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bui03400
]
AX768_05635
DNA repair and recombination proteins [BR:
bui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AX768_05635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
AAA_22
GvpD_P-loop
AAA_16
DnaB_C
ChlI
Lon_C
Rad51
RecA_N
nSTAND3
AAA_24
nSTAND_NTPase5
Dpy-30
SLFN-g3_helicase
AAA_5
AAA_14
GvpD_bR2
NACHT
Zn_ribbon_PaaD
NTPase_1
ABC_tran
MCM
DUF7129
AAA_29
Zn_ribbon_8
ZnF_RZ-type
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AMM13658
LinkDB
All DBs
Position
1:1222804..1224192
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AA seq
462 aa
AA seq
DB search
MAKVAKVKTLYVCTECGGQAPKWQGQCPACGAWNTLVESVAESPSAHRFQALAKTSPVQR
LSEIEASDVPRFTTGIGEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQSLAEIARERPA
LYISGEESGAQIALRAQRLGLLGDSGNAAPDLRLLAEIQLERIQATIDAERPEVAVIDSI
QTVYSEALTSAPGSVAQVRECAAQLTRIAKQTGTAIIMVGHVTKEGNLAGPRVLEHIVDT
VLYFEGDTHSSFRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQSVPGSC
VLVTQEGSRPLLVEVQALVDTAHVPNPRRLAVGLEQNRLALLLAVLHRHAGIACFDQDVF
LNAVGGVKITEPAADLAVLLAIQSSLRNKPLPKGLIVFGEVGLAGEIRPSPRGQDRLKEA
AKLGFSIALIPKANAPKQPIDGLEVIAVDRIEEAIDRARAFD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagtagcgaaggttaaaacgctttacgtatgcacggaatgcggcgggcaagcg
ccgaaatggcagggccagtgcccggcttgcggcgcgtggaatacgctggtggagtcggtg
gcggagtcgccgtcggcgcatcgcttccaggcgctggcgaagacatcgcctgtgcagcgt
ttgtcggaaatcgaagcgtcggatgtgccgcgcttcacaacgggtatcggcgagttcgat
cgcgtgctgggcggcggtctggtcgcgggcggcgtggtgttgatcgggggcgatccgggc
atcggcaagtcgacgctgttgctgcaatcgctcgcggaaatcgcgcgtgaacggcccgcg
ctttacatcagtggcgaagaatccggcgcgcagatcgcattgcgcgcccaacggctcggc
ttgctcggcgattcgggtaacgcggcgcccgatttgcgcctgctcgcggaaatccagctt
gagcggatccaggcaaccatcgatgccgaacggccggaagtggcggtcatcgattccatt
cagacggtttattccgaagcgctgacttcggcacccggatcggttgcacaggtgcgcgaa
tgcgcggcgcaactgacgcggatcgccaagcagaccgggacggccatcatcatggtcggt
cacgtgacgaaagagggcaatctcgccggacctcgcgtgctggaacatatcgtcgatacc
gtgctgtacttcgaaggcgatacccattcgtcgttccggctcgtgcgcgcgttcaagaac
cggttcggcgcggtcaacgagcttggtgtattcgcaatgaccgagcgcggtctgcgtggc
gtggcgaatccatcggcgctgtttttatcgcagcatgagcagagcgtgccggggtcctgc
gtgctcgtcacccaagagggatcgcggccgctgctggtggaggtacaagcactggtcgat
accgcccacgtgccgaatccgcgacgccttgccgtgggactggagcagaaccggctggca
ttgctgctggcggtgttgcatcggcatgcgggaattgcctgcttcgatcaggacgtgttc
ctgaacgcagtcggcggtgtgaagatcacagaacccgccgccgacctggccgtgctgctg
gccattcagtcatccctgcgcaacaagccgttgcccaagggcttgatcgtgttcggcgag
gtgggtcttgcgggcgaaatccggccatcgccgcgtggtcaggaccggctgaaggaagcg
gccaagctcggtttttcgatcgcgctgattccgaaggcgaacgcgccgaaacagcctatc
gacggactggaagtgatcgccgtggaccggatcgaagaagcaatcgaccgggcgcgtgcg
ttcgactga
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