Burkholderia sp. PAMC 28687: AX768_08810
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Entry
AX768_08810 CDS
T05699
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bui
Burkholderia sp. PAMC 28687
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bui03016
]
AX768_08810 (truB)
Enzymes [BR:
bui01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AX768_08810 (truB)
Transfer RNA biogenesis [BR:
bui03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AX768_08810 (truB)
Prokaryotic type
AX768_08810 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
YmcF-like
Motif
Other DBs
NCBI-ProteinID:
AMM14182
LinkDB
All DBs
Position
1:complement(1945537..1946466)
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AA seq
309 aa
AA seq
DB search
MNGSARPKIPRRLLDGVLLLDKPLGLSSNDALIRAKRIYLAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGVRTTTGDAEGEALETREVTCDEAAIHAAMTGFRG
DITQIPPMYSALKRDGKPLYEYARAGQTVEREARNVTILALEMIACALPNVTFRVTCSKG
TYVRTLAEDIGEKLGCGAHLIALRRTGVGTLTLENAVTLDTLSEATPEQRDSWLQPVDAL
LSTFPAVLLDADASRRFTQGQRLKLADISDAPANADRVRVYSRDEHRLLGVARAGEGVLA
PERLVVSAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaacggttccgctcgtccgaagatcccgcgtcgtctgctcgacggcgtgttgctgctc
gacaaacccctcggcctttccagcaacgacgcgctgattcgcgccaagcgaatttatctg
gcgaaaaaagccgggcataccggcacgctcgatccgctcgcgaccggtttgttgccgctg
tgctttggcgaggcgacgaagttttcgcaggatctgctcgaagccgataaaacctacgaa
gccaccatgcgcctcggcgttcgcacgaccacgggcgacgcggaaggcgaggcgctggaa
acgcgcgaggtcacctgcgacgaagccgcgatccatgcggcaatgaccggtttccgcggc
gacatcacgcaaattccgccgatgtattcagcgctcaaacgcgacggcaagcctttgtac
gaatacgcgcgagcggggcaaaccgtcgagcgcgaagcgcgcaacgtgaccatcctcgcg
ctggagatgatcgcgtgcgcgttgccgaacgtgacgtttcgcgtgacgtgcagcaagggc
acgtatgtacgcacgcttgctgaggatatcggtgaaaaactcgggtgtggggcgcatctg
atagcgctgcggcgcacgggcgtcggcacgttgacgctcgaaaacgctgtgacgctggat
acgctttcggaggcaacgcccgaacaacgcgatagctggctgcaaccggtcgatgcgctg
ctgtcgacatttccggccgttcttctcgacgccgatgccagccgccgcttcacgcaaggt
cagcggctcaagctcgcggatatcagcgacgcgccggcgaatgcggatcgtgtgcgcgta
tattcgcgcgacgaacaccgtctgctgggcgtggctcgagccggcgagggcgtgctggcg
ccggaacggctggtggtatcggcgggatga
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