Burkholderia sp. PAMC 28687: AX768_09795
Help
Entry
AX768_09795 CDS
T05699
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bui
Burkholderia sp. PAMC 28687
Pathway
bui03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AX768_09795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bui03400
]
AX768_09795
DNA repair and recombination proteins [BR:
bui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AX768_09795
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AX768_09795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
UB2H
DUF6827
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMM14347
LinkDB
All DBs
Position
1:complement(2116620..2118701)
Genome browser
AA seq
693 aa
AA seq
DB search
MSDTPLVEAAETLDESKFITFEGSPFQLYQPYPPAGDQPTAIATLVEGIEDGLSFQTLLG
VTGSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPSEYHKMIL
TLRTGDKMGQRDIIARLIAMQYNRNEADFSRGSFRVRGDTIDIFPAEHAEMAVRVELFDD
EIESMQLFDPLTGRVRNKIPRFTVYPSSHYVTPRDTVMRAIETIKTELRERLEFFHKDGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRMPSALDNRPLKFSEFERKMRQAVFVSATPADY
ENRTSGQVAEQLVRPTGLVDPEIEVRPARSQVDDVLAEINERVKVHERVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGSFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTIGRAARNVNGKAILYGDNITDSMKRAIGETERRRTKQIAHNL
AMGITPRGVTKRIKDIIDGVYNVDDARAELKEAQTRAKFEDMSEKQISKEIKRLEKQMMD
HAKNLEFEKAAQTRDQLSLLRQRVFGANVSDHP
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataccccgctagtagaagccgcagaaacgctcgatgaatcgaagttcatcacc
ttcgagggctcgccgttccagctttatcaaccgtatccgccagcaggcgaccagccaaca
gcgatcgcgacgctcgtcgaggggatcgaggacggcctgtcgttccagacgctgctcggc
gtgaccggttccggcaagactttcaccatggcgaacgtgatcgcgcgcatgggccgtccg
gccatcgtgtttgcgcccaacaagacgctcgccgcgcagttgtatgcggagtttcgtgag
tttttcccgcgtaatgctgtcgaatatttcgtttcctactacgattattaccagccggaa
gcctacgttccgcagcgggatttgttcatcgagaaagattcgtcgatcaacgagcatatc
gagcaaatgcggctttcagccacaaaaagcctgcttgagcggcgcgacgtggtgatcgta
gcgacggtgtcggccatttacggtatcggcaacccgtcggaatatcacaagatgattttg
acgctgcgcacgggcgacaagatggggcagcgcgacatcatcgcgcggctgatcgcgatg
cagtacaaccggaacgaagcggatttttcgcgtggcagcttccgcgtgcgcggcgacacc
atcgacattttcccggccgagcatgccgaaatggccgtgcgagtcgagcttttcgacgat
gaaatcgagtcgatgcagctcttcgatccactcaccggccgcgtgcgcaacaagattccg
cgcttcaccgtgtatccgtcgtcccattacgtgacgccgcgggacacggtaatgcgcgcc
atcgagacgatcaagactgaattgcgtgagcgcctcgagtttttccacaaggacggcaag
ctggttgaagcgcagcggctcgagcaacgcacgcgttttgacctggagatgctgcaggaa
ctggggttttgcaaaggcatcgagaactactcgcggcatttctcgggcgcggctcccggc
gaaccgccgccgacgctcgtcgattatttgccgcccgacgcgctgatgctgctcgacgag
tcgcacgtgctgatcggccagttgaacggcatgtacaacggtgaccgggcgcgcaaggag
aatctggtcgattacggcttccggatgccgtcggcgctggataaccggccgctgaaattc
agcgagttcgaacgcaagatgcgccaggcggtttttgtctcggcgacaccggccgattac
gaaaaccggacgtcagggcaggtcgccgaacagctcgtacggccgaccgggctggtcgac
cccgagatcgaggtacgtccggcccgctcgcaagtggacgacgtgctcgccgagatcaac
gagcgtgtcaaagtgcacgaacgggtgctcgtcacggtgctgaccaaacgcatggccgaa
caactcaccgaattcctggcggatcacggtgtgaaagtgcgctatctgcacagcgatatc
gatacggtcgagcgcgtggaaatcatccgcgatttgcgcctggggtctttcgatgtgctc
gtcgggatcaacttgctgcgggaagggctggatattccggaagtgtcattggtcgcgatt
ctcgacgctgacaaggaaggtttcctgcgtgccgagcgctcgctgattcagacgatcggc
cgggcggcccggaatgtgaacggcaaggcgatcctttacggcgacaacatcacggattcc
atgaaacgcgcgattggcgagacggaacgccggcgcacgaagcagatcgcgcacaacctc
gcgatgggcattacgccgcgcggcgtgacgaagcggatcaaggacatcatcgacggcgtg
tacaacgtcgacgacgctcgcgccgagctgaaggaagcgcagacgcgtgcgaagttcgag
gacatgtcggaaaagcagatttcgaaggaaatcaagcgcctcgaaaagcagatgatggat
cacgcgaaaaacctcgaattcgagaaagcggcgcagacgcgcgaccaactgtcgctgctg
cgtcagcgtgttttcggcgcgaacgtgagcgaccatccataa
DBGET
integrated database retrieval system
