Burkholderia sp. PAMC 28687: AX768_10600
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Entry
AX768_10600 CDS
T05699
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bui
Burkholderia sp. PAMC 28687
Pathway
bui03030
DNA replication
bui03430
Mismatch repair
bui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AX768_10600
03430 Mismatch repair
AX768_10600
03440 Homologous recombination
AX768_10600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bui03032
]
AX768_10600
03400 DNA repair and recombination proteins [BR:
bui03400
]
AX768_10600
Enzymes [BR:
bui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AX768_10600
DNA replication proteins [BR:
bui03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AX768_10600
DNA repair and recombination proteins [BR:
bui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AX768_10600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AMM14482
LinkDB
All DBs
Position
1:2287024..2287761
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AA seq
245 aa
AA seq
DB search
MRQLVLDTETTGLNARTGDRIIEIGCVELVNRRLTGNNLHFYVNPGRDSDPGALAVHGLT
TEFLSDKPKFADIAHELRDFVAGAELIIHNAPFDVGFMDVEFALLGMPCVKEVCGGVIDT
LVSAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GEMPTSGPGHAPRIALDDLQLPVLLASEEELSAHLAALDDLDKAVKGTSVWRIETVVGVE
VSAAP
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaactcgtactcgataccgaaacaaccggcctcaacgcccgcacgggcgaccgt
attattgaaattggctgcgtcgagcttgtgaatcgacggctaaccggtaacaacctgcac
ttctacgtgaatccagggcgcgacagcgatccgggcgcgctcgcggtgcacggcctcact
acggaatttctcagcgacaaacccaagttcgcggatatcgcgcatgagctgcgcgatttc
gtggcgggcgcggagctgatcatccataacgcaccgttcgacgttggtttcatggacgtc
gagttcgcccttctcggcatgccttgcgtgaaggaagtctgcggcggcgtgatcgacacg
ttggtgagcgcgaagcagatgttccccggcaagcgcaattcgctcgatgcgttgtgcgac
cggtttggcatcagcaacgcgcaccggacgctgcatggcgccctgctcgactcggagttg
ctcgcggaagtttatctggcgatgacgcgcggtcaggaaagcctcgtcatcgacatgctt
ggcgaaatgccgacgtccgggccgggtcatgcgccgcgtatcgcgctggatgatctgcag
ttgccggtgctgctcgcatcggaggaagaattgagtgcgcatctcgccgcactcgatgac
ctggacaaagcagtcaaagggaccagcgtttggagaatcgaaacggttgttggtgtcgag
gtttcggcggcgccttga
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