Burkholderia sp. PAMC 28687: AX768_12605
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Entry
AX768_12605 CDS
T05699
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bui
Burkholderia sp. PAMC 28687
Pathway
bui00260
Glycine, serine and threonine metabolism
bui00460
Cyanoamino acid metabolism
bui00630
Glyoxylate and dicarboxylate metabolism
bui00670
One carbon pool by folate
bui00680
Methane metabolism
bui01100
Metabolic pathways
bui01110
Biosynthesis of secondary metabolites
bui01120
Microbial metabolism in diverse environments
bui01200
Carbon metabolism
bui01230
Biosynthesis of amino acids
bui01240
Biosynthesis of cofactors
bui04981
Folate transport and metabolism
Module
bui_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AX768_12605 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AX768_12605 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AX768_12605 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AX768_12605 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AX768_12605 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AX768_12605 (glyA)
Enzymes [BR:
bui01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AX768_12605 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AMM14810
LinkDB
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Position
1:complement(2726124..2727371)
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AA seq
415 aa
AA seq
DB search
MFDRAKSTIAQVDPELFAAIEKENTRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAEGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYDKTEELAKEHKPKLIVAGASAFAL
KIDFERLSKIAKSVGAYFMVDMAHYAGLIAAGVYPNPVPFADFVTTTTHKSLRGPRGGVI
LMKAEYEKQINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKTYQQQVVDNARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKHITGKAAEAALGKAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGVAEAEQVGNLIADVLDAPEDEANLERVRVKVAALTKQFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatagagccaagagcaccatcgcccaagtcgatccggaactgtttgccgcgatc
gagaaggaaaatactcgtcaggaagatcacatcgagctgatcgcctcggaaaattacacg
agcccggccgtcatggccgcgcaaggttcgcaactgacgaacaagtacgccgaaggttat
ccgggcaagcgttactacggtggctgcgagtatgtcgacgtggtcgagcaactggcaatc
gatcgtgtgaagcaactgttcggcgccgaagcggcgaacgtgcagccgaattccggttcg
caggccaaccagggtgtgttcttcgccatgctgaaacccggcgacaccatcatgggcatg
agcctcgccgaaggcggtcacctgacgcacggctcccccgtgaacatgtcgggcaagtgg
ttcaacgtagtcagctacggcctgaacgaagctgaagacatcgactacgacaagaccgaa
gagctcgccaaggaacataagccgaagctgatcgtcgcgggcgcgtcggcgttcgcgctg
aagatcgacttcgagcgtttgtcgaagattgcgaaaagcgtcggcgcctatttcatggtc
gacatggcgcactacgcgggtctgattgcagcaggcgtatatccgaatcccgtgccgttc
gctgatttcgtcacgaccacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagcagattaactcggccatcttcccgggcattcaaggc
ggtccgctgatgcacgtgattgccggcaaggccgttgcgttcaaggaagcgctgtcgccg
gaattcaagacgtatcagcagcaagtcgtggataacgcgcgagtgctggctgaaacgctg
gttaagcgtggtttgcggatcgtctcgggacgcacggaaagccacgtgatgctggtcgat
ctgcgcgccaagcacatcaccggcaaggcagcggaagccgcgctcggcaaggcgcacatc
acggtcaacaagaatgccattccgaacgatccggaaaagccgttcgtgaccagcggcgtg
cgtctcggctcgccggccatgaccacgcgcggtttcggcgtggccgaggctgagcaggtc
ggcaatctgattgccgatgtgctggatgcgccggaagacgaagcgaaccttgagcgcgtg
cgcgtgaaggtcgctgcgttgaccaagcaatttccggtgtacggctaa
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