Burkholderia sp. PAMC 28687: AX768_16315
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Entry
AX768_16315 CDS
T05699
Name
(GenBank) farnesyl-diphosphate farnesyltransferase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bui
Burkholderia sp. PAMC 28687
Pathway
bui00100
Steroid biosynthesis
bui00909
Sesquiterpenoid and triterpenoid biosynthesis
bui01100
Metabolic pathways
bui01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
AX768_16315
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
AX768_16315
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bui01006
]
AX768_16315
Enzymes [BR:
bui01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
AX768_16315
Prenyltransferases [BR:
bui01006
]
Terpene biosynthesis
Squalene/phytoene synthase
AX768_16315
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AMM15826
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All DBs
Position
2:complement(215721..216773)
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AA seq
350 aa
AA seq
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MRNPSRAVLLGPLLKGVSRSFYLTLRVLPVGMRDPIGLAYLLARAADTIADTSLISPTQR
LELLLSLRNLVNGAPDDGTLTERLAQEVAGQQSLSDEKVLLESLGGALTVLSQLSDADRT
AVRGIVSTLTQGMEFDLHTFPDESSGRIAALNTLEELDTYTYLVAGCVGEFWTRMTYAHM
PGTLKGEPGITLSNGVRFGKALQMTNVLRDCSKDLRIGRCYLPSPMLNRYGLSPEDLLTP
GASRRAQPLLFELLRLTLDHYRAAVDYTFAIPARSVRLRLSCLWPVLIGLETLVLLVNND
EWLDPAKISKIGRNKVYRIVAASTLLEPSDRMLRAWIDRLITRIEARLDG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatccatcccgggccgtactccttggcccgctcctgaagggcgtctcgcggtcc
ttctacctcaccctgcgtgtgctgcctgtcgggatgcgcgatccgatcgggctggcttac
cttctggcgcgcgccgcggacacgatcgcggatacttcgctgatttcgccgacgcagcgg
ctggagctcttgttatcgctgcgcaacctggtgaacggcgcgcccgatgacggtacgttg
actgaacgcctcgcgcaggaggttgcaggccagcaaagtctctccgatgaaaaggtgctg
ctcgaatcgctcggcggcgcattgacggtgctgtcgcaattgagcgacgccgaccggaca
gccgtgcgcgggatcgtgtctaccctgacgcagggcatggaattcgacctgcatacgttc
cccgatgaatcgtcgggccgcattgctgcgctcaatacgctcgaagaactcgacacctac
acctatctggtcgccggttgcgtgggcgaattctggacgcggatgacgtacgcgcacatg
ccgggcacgttgaagggcgagcccggcatcacgttgtcgaacggcgttcgtttcggaaag
gcgctgcaaatgaccaacgtgctgcgtgattgcagcaaggacttgcgcatcgggcgttgt
tatctgccgtcgcccatgcttaaccgatacggtctgtcgccggaggatctgctcacacca
ggcgcgtcgcgccgtgcacaaccgctgttgttcgaactgttgcgcctgacgctggaccat
taccgcgcggcagtcgactacacgttcgccattccagcacgctcggtccgcctgaggctt
tcgtgtctgtggccggtgttgatcggcctggaaacgctggtacttctcgtcaataacgac
gaatggctcgatcccgcgaaaatatcgaagatcggtcgcaacaaggtgtacaggatcgtt
gcagcttcgacattgctcgagccatcggatcgaatgctgcgcgcatggattgaccgcttg
attacgcgcattgaagcgcgcctcgacggctga
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