Burkholderia sp. PAMC 28687: AX768_17620
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Entry
AX768_17620 CDS
T05699
Name
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
bui
Burkholderia sp. PAMC 28687
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bui03009
]
AX768_17620
Ribosome biogenesis [BR:
bui03009
]
Prokaryotic type
ribosomal protein modification factors
AX768_17620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AMM16052
LinkDB
All DBs
Position
2:498704..500908
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AA seq
734 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCV
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLTLKPAADASTYIAGKDLPLEETIANMSGVLAALGIKIEIA
SWRNLVPNVWSLHIRDAHSPMCFTNGKGSTKESALASALGEYIERLNCNHFYAGAFWGED
IADAAFVHYPNERWFKPGRKDALPAEVLDEYCLEIYNPDGELRGSHLIDTNSGNTRRGIC
SLPFVRHSDGKVVYFPSNLVENLYVSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEV
ALPDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNELPRPTFASEAVTEPNNFVEHFIDSSGIVSWRF
FSAKADFEFVEWDFSGYGENSNAEEAAALFSILEDMGKETYTAVYDQLGAVACRILVPGY
SEIYPVEDLVWDNTNKGLLFRADVLNLHRLDDAGLAALLDRLENNELDEHSDIATLIGIE
FDENTDWGQLTVLELKLLIHLALQQFEEAQELVGAFLQYNDNTVERGLFYQALNVVLEVL
LDDGLELDDYVVNFRRMFGNARMDAVMGSVDGSVRFYGLTPTSLNLEGLDRHHRLIDSYK
KLHKARASAAALAR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaagtcaactttctcgataagctgcgtctcgaagcaaaattcgatgacttc
acggtagtagctgaccagcctattcgctataagggcgacggctcggcgcctggtcccttc
gactatttcctggcctcgtcggccctgtgtgcagcttatttcgtaaagttgtactgcgtg
actcgcaatattcctaccgaaaatatccgcctgtcgcaaaataatattgttgatccggag
aaccggtaccagcagattttcaagattcaggtcgagctgccggcggacatctctgcgaaa
gatcgccagggcattttgcgctccatcgaccgatgtaccgtgaagaaagtggtccaggcc
ggacccgagtttgttatcgaagaggtcgagaacctggatgccgatgcccaggcgttgctg
acgctgaagccagcggctgacgccagtacctacattgcgggcaaggatctgccgttggag
gagaccattgccaatatgtctggcgtcctggcggccttgggcatcaagattgaaatcgct
tcgtggcgcaatcttgttcccaatgtgtggtcactgcatatccgtgatgcgcactcgccg
atgtgttttaccaatggcaagggctcaaccaaggaaagcgcgctggcgtcggcgttgggg
gaatatatcgagcggcttaattgcaaccatttctacgccggcgcgttctggggcgaagac
attgccgatgcggcgtttgtccattatccgaacgaacgctggttcaagcctggccgcaag
gatgcgctgccggctgaagtcctggatgagtactgtctggaaatctacaatcccgacggc
gagctacgtggctcgcatctgatcgacaccaactccggcaatacacggcgcggtatctgt
tcgctgccgtttgtgcggcattcggacggcaaggtggtgtatttcccgtcgaacctggta
gaaaatttgtatgtcagcaatggcatgagtgccgggaacacgctggccgaagcgcaggtg
caatgtctgtcggaaattttcgagcgggcggtaaagcgcgaaatcctggaaggtgaagtc
gcattgcctgacgtgccgcaggaggtgctggcgaaataccccggcattctggccggcatt
cagggcttggaagagcagggctttccggtgctggtgaaggatgcgtcgctgggaggggtg
tatccggtaatgtgcgtcactttgatgaacccgcggacgggcggtgttttcgcgtccttc
ggcgcgcatccaagcctggaggttgcgctggagcgtagtctgacggagttgctgcagggc
cgcagttttgaaggcctgaacgaactaccacgacccacttttgccagtgaagccgtgact
gagccgaataactttgtcgagcacttcatcgattccagtggcatcgtgtcatggcgcttt
ttcagcgccaaagcggatttcgagtttgtcgagtgggatttttccggttacggtgaaaac
tccaatgctgaggaagccgcagcgttgttcagcattctcgaagacatgggcaaagagacg
tatacggcggtgtatgaccaactgggcgccgtagcctgccggattttggtgcccgggtat
tcggaaatttatccagtagaggatctggtctgggacaacacgaacaagggactgttgttc
cgcgccgatgtcttgaacttgcatcgcctggacgatgccggcctggcagcattgcttgac
cggttggaaaacaacgagctggatgagcactcggatatcgccactttgatcggtatcgaa
tttgacgagaatacggactggggacagttgaccgttctcgagttgaagctgctgattcat
ctcgccctacagcaattcgaggaggcccaggagctggtaggtgccttcctgcagtacaac
gacaacacggtcgagcgcggattgttttaccaggctttgaacgtggtgctggaggtgctg
ctcgatgatggcctggaactggacgactacgtggtcaacttccgtcgaatgtttggcaac
gcccggatggacgctgtaatgggatcggtagacggcagcgtgcggttctacggtttaacg
ccgacgagtttgaatcttgagggtctcgacaggcaccaccgcctgatcgacagctacaag
aaattgcataaggcgcgcgccagtgcggcggctttggcgcgttag
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