Burkholderia sp. PAMC 28687: AX768_24240
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Entry
AX768_24240 CDS
T05699
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
bui
Burkholderia sp. PAMC 28687
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bui03000
]
AX768_24240
Transcription factors [BR:
bui03000
]
Prokaryotic type
Helix-turn-helix
Other families
AX768_24240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS
PAS_4
AAA_5
Mg_chelatase
HTH_7
AAA_16
AAA_3
AAA
PAS_8
PAS_9
Oxidored_nitro
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
AMM17333
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Position
3:308275..310167
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AA seq
630 aa
AA seq
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MNPPPRIWAVGISKLRDLYRDMAAEYDGIADLRIVPLGYEDAVHEIENAGDARPDVVVAA
GSNGAYLKARIGVPVVLVNPTGFDVMHALARARREGEPVGLVMHGETPAEVARFFRAFGA
AIECASYVSAEDAESCVLDLRDRGVQAIVGPGLVTELAEKAGMKSVFLYSRASVQGAFET
ALEVARATLGETQRRRRLDQVLQHLRDGVIALAADGRIEALSGKMAEMLRLAPSQVVGKR
LRDLAPEVASAVPDEPGESLETVRGASYVVHRSAWGDASAASGSIVTFQESVALQRMDRS
VRARQRSPSLVARYTIDDLSGSTPAIEQVRQRARRYAGSDATVLIRGESGTGKELVAQGI
HGESARRDFAFVALNCGAFPETLLESELFGYEEGAFTGARRGGKAGLIESAHRGTLFLDE
IGEMPLPLQSRLLRVLQEREVVRLGSTEPLQVDVRIVAATHRALSERMKAGEFRADLFYR
LNILNLHLPPLRERAADIAALAAQLLWRTGRVVSFDAALKALDPVMPIFTSYAWPGNVRE
LQNVIERISLELEDPAAKPLKLTPRLIRSIAPELEEETMNSNQESLKARSRKLQADEIRT
MLDSFGGDRGRTAKALGISKTTLWRKLTTR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcctccacgcatctgggccgtaggtataagcaagctccgcgatctgtatcgc
gacatggcggccgaatacgacggcattgccgatctgcgtattgtgccgctcggttacgag
gacgcggtgcacgagatcgagaacgccggcgatgcccgcccagatgtggtcgttgctgcc
ggatcgaacggggcgtacctgaaggcgcgaatcggcgttccggtcgtactggtgaacccg
accgggttcgatgtcatgcatgcgctcgcgcgtgcgcgccgcgagggcgaaccggtcggt
ctcgtgatgcacggcgagacacccgctgaagtcgcccgctttttccgcgcgttcggtgcg
gcgatcgaatgcgcgtcctacgtgtcggcggaggacgcggaatcctgcgtgctggatctg
cgtgaccgcggcgtgcaggcgattgtcgggccgggtctcgtcacggaactcgcggaaaag
gccggcatgaagtcggtgtttctctactcgcgagcgtccgttcagggcgcgttcgaaaca
gcgctggaagtggcgcgcgcgaccctcggcgagacgcagcgccgtcgccggctcgatcag
gtcctgcaacatctgcgggacggcgtgatcgcgcttgccgccgatggccgcatcgaagcg
ctcagcggcaagatggccgagatgctgcgcctcgcgccatcgcaagtcgtcggcaagcgc
ctgcgcgacctggcgcccgaagtggctagcgccgtgccggacgaacccggcgagtcgctg
gagacggtgcgcggggcgagctatgtggtacatcgaagcgcttggggcgatgcatcggcg
gcttcggggtccatcgtcacgtttcaggagtcagtggcattgcagcgcatggacaggtcg
gtgcgtgcgcggcaacgctcgccgtcgctcgtcgcgcgatacacgatcgatgacctcagc
ggcagcactccggctatcgagcaggttcgccagcgcgctcgccgatatgcgggctccgac
gcgaccgtgctgattcgcggcgagagcggcacgggcaaggaactggttgcgcaaggcatc
catggcgaaagcgcgcggcgcgacttcgcgttcgtcgcgttgaattgcggcgcgtttccg
gaaacgctgctggaaagcgaactcttcggctacgaggagggggcgttcacgggcgcgcgt
cgcggcggcaaggctggactgatcgagtcggcgcatcgcggcacgcttttcctcgatgaa
atcggcgagatgccgttgccgctgcaaagccggttgctgcgcgtgctgcaggagcgcgaa
gtcgtgcggctgggctccactgaaccactgcaggtcgatgtgcggatcgtcgcggcgacg
catcgcgcgttgagcgagcgaatgaaggcgggtgagtttcgcgcggaccttttttatcgg
ctgaatatcctgaatctgcacctgccgccgttgcgcgaacgggcggcggatatagcggca
ctggccgcgcaattgttgtggcgcaccgggcgcgtggtttcattcgatgccgcgctcaag
gcactcgacccggtcatgccgatattcacgagctacgcctggcccggaaacgtgcgcgaa
ttgcagaacgtgatcgaaaggatttcgctggagctggaagatccggccgcgaagccgttg
aagttgacgcccaggttgatacggtcgatagcgcctgagctcgaggaagaaacaatgaat
tcgaatcaggaatcgctcaaggcgcgcagccgcaagttgcaggccgatgagatccgaacg
atgctggattcgttcggcggcgatcgcgggaggacggcgaaggcgctgggaatcagcaag
acgaccttatggcggaaactgacgacacgctga
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