KEGG   Burkholderia sp. PAMC 28687: AX768_25530
Entry
AX768_25530       CDS       T05699                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bui  Burkholderia sp. PAMC 28687
Brite
KEGG Orthology (KO) [BR:bui00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bui03400]
    AX768_25530
Enzymes [BR:bui01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AX768_25530
    5.6.2.6  RNA 3'-5' helicase
     AX768_25530
DNA repair and recombination proteins [BR:bui03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AX768_25530
SSDB
Motif
Pfam: DEAD_assoc DEAD WH_Lhr WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 DprA_WH PhoH AphA_like GntR
Other DBs
NCBI-ProteinID: AMM17556
LinkDB
Position
3:592600..596940
AA seq 1446 aa
MTAARKMTPKPLAGFHPAVANWFNRHFPAPTEAQARAWPLLKAGRSTLVAAPTGSGKTLT
AFLAAIDQLVHESVKEPLADETSVVYVSPLKALSNDIRVNLEDPLAGISAELERLGLPPV
EIRAAVRTGDTTQKERNAVRKRPPHILVTTPESLYVLLGSDSGRSMLSTVRTVIIDEIHA
VAGNKRGAHLSLSLERLDALCMERRQETPVRVGLSATQKPIELVAKFLTGNRPCSIVDVG
HVRKRDLALELPPVPLDAIMSNDVRERVYDRLAELVGMHSTTLVFVNTRRMAERVARHLT
ERLGKTAVAAHHGSLAKEQRLDAEQRLKRGELQVLIATASLELGIDIGDVELVCQLGSPG
SIGGFLQRVGRSGHQVGGTPKGRLFPESRDDLIECAALLDCVARGELDALHIPNAPLDVL
AQQIAAEVASREWHEDAFFALVRRAMPYASLERAQYDAVLRMLAEGYTGRTGVRGAYVHR
DAVTHTVRGRRGGRLTAVTSGGAIPDNADFAVLLEPQGLQIGTVNEDFAVESLAGDVFQL
GNASYKILRVEGGRVRVEDAHGQPPNIPFWLGEAPGRSDELSAAIARLHQQVDTWLGSST
VAETIAKLDETTGIGEAAARQIIEYLARSRAALSVLPTQDTLVMERFFDASGGTQLVIHT
PFGSRVNRAWGLALRKRFCRTFNFELQAAATEDAIVLSLTGGHSFPLDEVWRYLRPATAE
HVLIQALLDAPLFGVRWRWNATNALALPRYAGGRRVAPQLQRMKSEDLLAAVFPDQAACI
ENVVGEREVPHHPLVDQTIDDCLHDAMDCDAWLALLRRIESGDIRLVTRDLPAPSPLAAE
VLSARPYAFLDDAPIEERRTQAVLARRWTDPDSADDLGALDADAIAGVREEAWPSVRNAD
EMHEALSTLACITDAEADANEGWPAWLTALAQSGRATRFQVASKEGLWVPVERLTCVRAI
HPVASMQPPLKPLQGFDDAWTEDDALVEIIRARLSGFGPLPVAVIARALVVPASPVALAL
TRLEAEGNVMRGRFTPGATEEEWCERHLLARIHRYTVRRLRREIEPVELQDFMRFQFDWQ
HLSADSRADPHADGHDALMSVIEQLEGYEAPAVAWEDEILPARLGEYSMSWLDDLCRAGK
VVWSRPGIRSRSSGGPVRTTPIVLLPRRNLPAWNALMQPVQSPEPSSRAQMVFDALTQHG
AMFFDELRSDVRLLDTELETALGELVSMGLVNADSFAGLRALLAPASRRNAFSSRRPRRG
GRFIGGMDDAGRWALLRRPQSDGAPGDALEHVAMILLRRYGVVFWRLLDREADWLPPWRD
LLRVFHRLEARGEIRGGRFVAGLSGEQFALPDAVPLLRDMRNRPADGSLIAISAVDPLNL
AGTLLPGEKVPAIPGNRVLYRDGVPVGAVIAGKTRFLTELDHESQERVRWHLVRRSFDRM
PVLSGS
NT seq 4341 nt   +upstreamnt  +downstreamnt
atgaccgcagccaggaaaatgactccaaaaccgctcgccggctttcatcccgccgttgcg
aactggttcaaccggcatttccccgcgcccaccgaggcgcaggcccgtgcgtggccgctg
ctgaaagccgggcgctcgacgcttgtcgctgcacctaccggttcgggcaagacattgacg
gcgttccttgcggcgatcgatcagctcgtgcatgaaagcgtgaaggaaccgttggccgac
gagacctccgtggtctacgtctcgccgctgaaggcgctttccaacgatatccgcgtgaat
ctcgaagacccgctcgccgggatctcggcggaactggaacggctcggcctgccgccggtt
gaaattcgcgcggccgtgcgcaccggcgacaccacgcaaaaggaacgcaacgctgtcagg
aagcggccgccgcatatcctcgtcaccacgccggaatctctctacgtgctactgggttcg
gattccggacgctcgatgttgtcgacggtccgcacggtgatcatcgatgaaatccatgcg
gtcgccgggaacaagcgcggcgcgcatctttcgctgagcctcgagcggctcgacgcactg
tgcatggagcggcggcaggagacgccggtgcgggtcgggttatcggcgacacaaaagccg
atcgaactcgtcgcgaagttcctgacgggcaaccggccgtgttccattgtcgatgtcggc
cacgtccgcaaacgcgacctcgcgctggaactgccgcccgtgccgctcgacgccatcatg
tcgaatgacgtgcgcgagcgtgtctacgaccggctcgccgaactcgtcggcatgcacagc
actacgctcgtgttcgtgaatacgcgccgcatggccgagcgcgtcgcgcgccatctcacc
gagcggctcggcaagaccgcggtcgccgcgcatcacggcagtcttgcgaaggagcagcgg
ctcgatgccgagcagcgcctgaagcgcggcgagttgcaagtgctgatcgcgacggcatcg
ctggaactgggtatcgatattggcgatgtggagctggtttgccagctcggctcgccgggg
tcgatcggcggctttttgcagcgcgtcgggcgttcggggcatcaggtcggcggcacgcca
aaaggacggctcttccccgagtcgcgcgacgacctgatcgaatgcgcggcgttgctcgat
tgcgtcgcccgtggcgaactcgatgcgttgcatatcccgaacgcgccgctcgatgtcctc
gcgcagcagatcgccgccgaagtcgcgagccgcgaatggcatgaggacgcgttcttcgcg
ctcgtgcgccgcgcaatgccgtacgcctcgctcgaacgcgcgcaatacgatgcggtgttg
cggatgctcgccgaaggctacacgggacgaaccggcgtgcgcggagcttatgtgcatcgc
gatgcggtgacgcatacggtgcgcggccggcgcggcgggcgcctgaccgctgtcacgtcc
ggcggcgcgattcccgacaacgcggacttcgcggtcctgcttgaaccgcaaggcttgcag
atcggcacggtcaacgaagatttcgcggtcgaaagtcttgccggcgatgtgttccagctc
ggcaacgcgtcgtacaagatcctgcgtgtggaaggcgggcgggtccgcgtggaagacgca
catggtcagccgccgaacattccgttctggcttggcgaagcgcccggacgcagcgatgag
ctctcggctgcgatagcgcgcttgcatcagcaagtggatacgtggctcggctcatctacg
gttgcagaaacgatcgccaagctcgatgaaaccacgggcattggagaggcagcggcacgg
cagatcatcgaatacctggctcggtcgcgtgctgcgctatccgtcttgccgacacaggat
acgctcgtgatggaacgtttcttcgatgcctccggcggcacgcagctcgtcattcacacg
ccgttcggcagccgcgtcaaccgtgcgtggggactcgcgctgcgaaagcgtttttgccgc
acattcaacttcgagttgcaggcggcggccactgaggacgcgatcgtcttgtcgctgacg
ggcggccacagcttcccactcgatgaagtctggcgttatctgcgtccggccacggcggaa
catgtgctgatccaggcgctgctcgacgcgccgcttttcggcgtgcgctggcgctggaac
gcgaccaacgcgctggcgttgccgcgttatgccggaggcagacgcgttgcgccgcaactg
caacggatgaaaagtgaggacctgcttgcagccgtgtttccggaccaggcggcgtgcatc
gaaaacgtggtgggcgagcgcgaggtgccgcatcacccgctggtggaccagacgattgac
gactgcctgcacgacgccatggattgcgatgcgtggctggcgttgctgcggcgtatcgaa
agtggcgatatcaggctagtcacgcgcgatctgcccgcgccgtcgccgctggcggcggag
gttttatcggcgcgtccgtacgcctttctcgacgatgccccgatcgaggaacgccgcacg
caagccgtactggcccgccgctggaccgatcccgattccgccgacgatctcggcgcgctc
gatgccgacgccatcgcgggcgtgcgcgaggaagcgtggccgtcggtgcgtaacgccgat
gaaatgcatgaagcgctgtcaacgcttgcgtgcatcacggacgccgaggcagacgccaac
gaaggctggcctgcatggctgaccgcgttggcgcagtcgggccgtgcgacgcgtttccag
gtggcatcgaaggaggggttgtgggtgccggtcgaacgtctcacatgcgtgcgcgcgatc
catccggtcgcatcgatgcaaccgcctttgaaaccgctgcagggcttcgacgacgcctgg
acagaagacgatgcgctcgttgaaatcatacgcgcgcggctgagcggttttggtccgctg
cccgtcgcggtaatcgcacgcgcgctcgtggtcccggcgtcgccggtggcgctcgcgctg
acgcgtctcgaagccgagggaaatgtcatgcgcggccgcttcacgccgggcgccacggaa
gaagaatggtgcgagcgtcatctgctcgctcgtatccaccgttacaccgtgcgccgcctg
cgtcgcgagatcgaaccggtcgagttgcaggatttcatgcgcttccagttcgactggcag
catttgagcgcggattccagagccgatccgcatgccgacggccatgacgcgctgatgtcg
gtcatcgagcagctcgagggttatgaagccccggcggtggcatgggaggacgagatcctg
cccgcgcgtctcggcgaatattcgatgtcctggctcgacgacctctgccgcgccggcaag
gtggtctggagccgtccgggcatacgctcgcgcagctcgggcggaccggtgcgcaccacg
cctatcgtcctgctgccgcgccgcaacctgccggcgtggaatgcgttgatgcagccggtc
cagtcgcccgagccgtcatcgcgtgcgcaaatggtcttcgacgcgctcacacaacacggc
gccatgttcttcgacgagctgcgctccgatgtccgcctgctcgacaccgaactcgagacg
gcgctgggcgaactggtatcgatgggactggtcaacgccgatagtttcgccggcttgcgc
gcattgctcgcgccggcctcgcggcgcaacgcattctccagccgccggccaaggcgggga
gggcgtttcataggcgggatggatgacgcgggacgctgggcgttgctgcgccgcccgcaa
agcgacggcgcaccgggagatgcactggaacacgtcgccatgatcctgctgcgccgatac
ggcgtcgtcttctggcgtctgctcgaccgtgaggccgactggctgccgccgtggcgcgac
ctgctgcgggtgttccaccgcctggaagcgcgcggcgagattcgcggcggccgttttgtc
gccggcttgtcgggtgaacaatttgcattgcccgatgccgtgccgcttctgcgcgacatg
cgcaaccgtcccgccgatggcagcctgatcgccatcagcgccgtcgatccgctgaatctc
gcgggaacgttattgccgggcgagaaagtccccgccattccgggtaatcgcgtgctttat
cgtgatggcgtgccggtgggcgccgttattgccgggaaaacgcgctttctgacagaactc
gatcacgaatcgcaagaacgcgttcgatggcatctcgtgcggcgcagtttcgatcggatg
ccggttttatcgggatcttga

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